RNA–Protein interactions for RNA: ENST00000591844.5

ZFP28-204, Transcript of ZFP28 zinc finger protein, humanhuman

TSL 1 (best) BASIC

Gene ZFP28, Length 3,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28-204ENST00000591844 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
ZFP28-204ENST00000591844 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
ZFP28-204ENST00000591844 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
ZFP28-204ENST00000591844 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
ZFP28-204ENST00000591844 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
ZFP28-204ENST00000591844 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
ZFP28-204ENST00000591844 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.36
ZFP28-204ENST00000591844 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
ZFP28-204ENST00000591844 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
ZFP28-204ENST00000591844 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
ZFP28-204ENST00000591844 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
ZFP28-204ENST00000591844 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
ZFP28-204ENST00000591844 HRCP23327 699 aa23.13■■□□□ 1.29
ZFP28-204ENST00000591844 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
ZFP28-204ENST00000591844 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
ZFP28-204ENST00000591844 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
ZFP28-204ENST00000591844 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
ZFP28-204ENST00000591844 ABCC9O60706 1549 aa22.53■■□□□ 1.2
ZFP28-204ENST00000591844 SCRIBQ14160 1630 aa22.45■■□□□ 1.19
ZFP28-204ENST00000591844 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
ZFP28-204ENST00000591844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
ZFP28-204ENST00000591844 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
ZFP28-204ENST00000591844 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
ZFP28-204ENST00000591844 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
ZFP28-204ENST00000591844 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
ZFP28-204ENST00000591844 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
ZFP28-204ENST00000591844 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
ZFP28-204ENST00000591844 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
ZFP28-204ENST00000591844 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
ZFP28-204ENST00000591844 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
ZFP28-204ENST00000591844 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
ZFP28-204ENST00000591844 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
ZFP28-204ENST00000591844 APLP2Q06481 763 aa21.71■■□□□ 1.07
ZFP28-204ENST00000591844 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
ZFP28-204ENST00000591844 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
ZFP28-204ENST00000591844 WIZO95785 1651 aa21.57■■□□□ 1.04
ZFP28-204ENST00000591844 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
ZFP28-204ENST00000591844 ITGAEP38570 1179 aa21.52■■□□□ 1.03
ZFP28-204ENST00000591844 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
ZFP28-204ENST00000591844 SOGA1O94964 1423 aa21.44■■□□□ 1.02
ZFP28-204ENST00000591844 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
ZFP28-204ENST00000591844 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
ZFP28-204ENST00000591844 ATP1B4Q9UN42 357 aaPredicted RBP21.41■■□□□ 1.02
ZFP28-204ENST00000591844 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
ZFP28-204ENST00000591844 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
ZFP28-204ENST00000591844 NACADO15069 1562 aa21.37■■□□□ 1.01
ZFP28-204ENST00000591844 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
ZFP28-204ENST00000591844 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
ZFP28-204ENST00000591844 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
ZFP28-204ENST00000591844 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
ZFP28-204ENST00000591844 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
ZFP28-204ENST00000591844 MIER1Q8N108 512 aa21.1■□□□□ 0.97
ZFP28-204ENST00000591844 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
ZFP28-204ENST00000591844 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
ZFP28-204ENST00000591844 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
ZFP28-204ENST00000591844 CLIP1P30622 1438 aa21.01■□□□□ 0.95
ZFP28-204ENST00000591844 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
ZFP28-204ENST00000591844 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
ZFP28-204ENST00000591844 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
ZFP28-204ENST00000591844 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
ZFP28-204ENST00000591844 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
ZFP28-204ENST00000591844 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
ZFP28-204ENST00000591844 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
ZFP28-204ENST00000591844 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
ZFP28-204ENST00000591844 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
ZFP28-204ENST00000591844 BCANQ96GW7 911 aa20.79■□□□□ 0.92
ZFP28-204ENST00000591844 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
ZFP28-204ENST00000591844 EEA1Q15075 1411 aa20.76■□□□□ 0.91
ZFP28-204ENST00000591844 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
ZFP28-204ENST00000591844 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
ZFP28-204ENST00000591844 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
ZFP28-204ENST00000591844 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
ZFP28-204ENST00000591844 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
ZFP28-204ENST00000591844 ATAD2BQ9ULI0 1458 aa20.6■□□□□ 0.89
ZFP28-204ENST00000591844 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
ZFP28-204ENST00000591844 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
ZFP28-204ENST00000591844 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
ZFP28-204ENST00000591844 KCNH8Q96L42 1107 aa20.52■□□□□ 0.88
ZFP28-204ENST00000591844 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
ZFP28-204ENST00000591844 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
ZFP28-204ENST00000591844 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
ZFP28-204ENST00000591844 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
ZFP28-204ENST00000591844 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
ZFP28-204ENST00000591844 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
ZFP28-204ENST00000591844 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
ZFP28-204ENST00000591844 KIF21BO75037 1637 aa20.38■□□□□ 0.85
ZFP28-204ENST00000591844 CUX2O14529 1486 aa20.37■□□□□ 0.85
ZFP28-204ENST00000591844 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
ZFP28-204ENST00000591844 NEFLP07196 543 aa20.35■□□□□ 0.85
ZFP28-204ENST00000591844 FKBP8Q14318 412 aa20.33■□□□□ 0.84
ZFP28-204ENST00000591844 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
ZFP28-204ENST00000591844 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
ZFP28-204ENST00000591844 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
ZFP28-204ENST00000591844 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
ZFP28-204ENST00000591844 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
ZFP28-204ENST00000591844 IRX6P78412 446 aaPredicted RBP20.25■□□□□ 0.83
ZFP28-204ENST00000591844 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
ZFP28-204ENST00000591844 ANP32CO43423 234 aa20.23■□□□□ 0.83
ZFP28-204ENST00000591844 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
ZFP28-204ENST00000591844 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms