RNA–Protein interactions for RNA: ENST00000271636.11

CGN-201, Transcript of cingulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGN, Length 5,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-201ENST00000271636 NISCHQ9Y2I1 1504 aa29.02■■■□□ 2.24
CGN-201ENST00000271636 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
CGN-201ENST00000271636 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
CGN-201ENST00000271636 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CGN-201ENST00000271636 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
CGN-201ENST00000271636 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
CGN-201ENST00000271636 ABCC9O60706 1549 aa23.98■■□□□ 1.43
CGN-201ENST00000271636 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
CGN-201ENST00000271636 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
CGN-201ENST00000271636 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
CGN-201ENST00000271636 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
CGN-201ENST00000271636 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
CGN-201ENST00000271636 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
CGN-201ENST00000271636 NACADO15069 1562 aa23.4■■□□□ 1.34
CGN-201ENST00000271636 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
CGN-201ENST00000271636 APLP2Q06481 763 aa23.26■■□□□ 1.31
CGN-201ENST00000271636 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
CGN-201ENST00000271636 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
CGN-201ENST00000271636 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
CGN-201ENST00000271636 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
CGN-201ENST00000271636 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
CGN-201ENST00000271636 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
CGN-201ENST00000271636 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
CGN-201ENST00000271636 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
CGN-201ENST00000271636 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
CGN-201ENST00000271636 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
CGN-201ENST00000271636 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
CGN-201ENST00000271636 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
CGN-201ENST00000271636 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
CGN-201ENST00000271636 HRCP23327 699 aa22.44■■□□□ 1.18
CGN-201ENST00000271636 PELP1Q8IZL8 1130 aaKnown RBP22.44■■□□□ 1.18
CGN-201ENST00000271636 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
CGN-201ENST00000271636 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
CGN-201ENST00000271636 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
CGN-201ENST00000271636 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
CGN-201ENST00000271636 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
CGN-201ENST00000271636 EEA1Q15075 1411 aa22.26■■□□□ 1.15
CGN-201ENST00000271636 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
CGN-201ENST00000271636 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
CGN-201ENST00000271636 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
CGN-201ENST00000271636 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
CGN-201ENST00000271636 WIZO95785 1651 aa22.09■■□□□ 1.13
CGN-201ENST00000271636 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
CGN-201ENST00000271636 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
CGN-201ENST00000271636 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
CGN-201ENST00000271636 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.09
CGN-201ENST00000271636 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
CGN-201ENST00000271636 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
CGN-201ENST00000271636 TNIKQ9UKE5 1360 aa21.84■■□□□ 1.09
CGN-201ENST00000271636 ITGAEP38570 1179 aa21.8■■□□□ 1.08
CGN-201ENST00000271636 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
CGN-201ENST00000271636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
CGN-201ENST00000271636 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
CGN-201ENST00000271636 CLIP1P30622 1438 aa21.77■■□□□ 1.08
CGN-201ENST00000271636 ABCC8Q09428 1581 aa21.7■■□□□ 1.07
CGN-201ENST00000271636 MYT1Q01538 1121 aa21.69■■□□□ 1.06
CGN-201ENST00000271636 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
CGN-201ENST00000271636 SOGA1O94964 1423 aa21.62■■□□□ 1.05
CGN-201ENST00000271636 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
CGN-201ENST00000271636 P3H3Q8IVL6 736 aa21.52■■□□□ 1.04
CGN-201ENST00000271636 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
CGN-201ENST00000271636 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
CGN-201ENST00000271636 FBLN2P98095 1184 aa21.46■■□□□ 1.03
CGN-201ENST00000271636 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
CGN-201ENST00000271636 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
CGN-201ENST00000271636 CUX2O14529 1486 aa21.44■■□□□ 1.02
CGN-201ENST00000271636 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
CGN-201ENST00000271636 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
CGN-201ENST00000271636 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
CGN-201ENST00000271636 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
CGN-201ENST00000271636 ERICH6Q7L0X2 663 aa21.33■■□□□ 1.01
CGN-201ENST00000271636 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
CGN-201ENST00000271636 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
CGN-201ENST00000271636 FHAD1B1AJZ9 1412 aa21.31■■□□□ 1
CGN-201ENST00000271636 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
CGN-201ENST00000271636 TRIM52Q96A61 297 aa21.29■■□□□ 1
CGN-201ENST00000271636 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
CGN-201ENST00000271636 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
CGN-201ENST00000271636 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
CGN-201ENST00000271636 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
CGN-201ENST00000271636 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
CGN-201ENST00000271636 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
CGN-201ENST00000271636 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
CGN-201ENST00000271636 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
CGN-201ENST00000271636 CFTRP13569 1480 aa21.18■□□□□ 0.98
CGN-201ENST00000271636 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
CGN-201ENST00000271636 NEFLP07196 543 aa21.16■□□□□ 0.98
CGN-201ENST00000271636 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
CGN-201ENST00000271636 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
CGN-201ENST00000271636 KIF21BO75037 1637 aa21.1■□□□□ 0.97
CGN-201ENST00000271636 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
CGN-201ENST00000271636 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
CGN-201ENST00000271636 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
CGN-201ENST00000271636 CLSPNQ9HAW4 1339 aa21.05■□□□□ 0.96
CGN-201ENST00000271636 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
CGN-201ENST00000271636 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
CGN-201ENST00000271636 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
CGN-201ENST00000271636 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
CGN-201ENST00000271636 CCNB3Q8WWL7 1395 aa21.02■□□□□ 0.95
CGN-201ENST00000271636 TONSLQ96HA7 1378 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 229.6 ms