RNA–Protein interactions for RNA: ENST00000377961.2

SCGN-202, Transcript of secretagogin, EF-hand calcium binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCGN, Length 1,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCGN-202ENST00000377961 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
SCGN-202ENST00000377961 CCDC180Q9P1Z9 1646 aa31.26■■■□□ 2.59
SCGN-202ENST00000377961 ZCCHC6Q5VYS8 1495 aaKnown RBP29.82■■■□□ 2.36
SCGN-202ENST00000377961 ABCC9O60706 1549 aa29.74■■■□□ 2.35
SCGN-202ENST00000377961 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
SCGN-202ENST00000377961 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
SCGN-202ENST00000377961 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
SCGN-202ENST00000377961 NACADO15069 1562 aa29.14■■■□□ 2.26
SCGN-202ENST00000377961 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
SCGN-202ENST00000377961 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
SCGN-202ENST00000377961 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
SCGN-202ENST00000377961 UNC13AQ9UPW8 1703 aa28.41■■■□□ 2.14
SCGN-202ENST00000377961 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
SCGN-202ENST00000377961 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.05
SCGN-202ENST00000377961 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
SCGN-202ENST00000377961 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
SCGN-202ENST00000377961 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
SCGN-202ENST00000377961 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
SCGN-202ENST00000377961 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
SCGN-202ENST00000377961 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
SCGN-202ENST00000377961 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
SCGN-202ENST00000377961 WIZO95785 1651 aa27.17■■□□□ 1.94
SCGN-202ENST00000377961 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
SCGN-202ENST00000377961 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
SCGN-202ENST00000377961 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
SCGN-202ENST00000377961 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
SCGN-202ENST00000377961 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
SCGN-202ENST00000377961 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
SCGN-202ENST00000377961 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
SCGN-202ENST00000377961 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
SCGN-202ENST00000377961 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
SCGN-202ENST00000377961 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
SCGN-202ENST00000377961 CFTRP13569 1480 aa26.16■■□□□ 1.78
SCGN-202ENST00000377961 CADPSQ9ULU8 1353 aa26.11■■□□□ 1.77
SCGN-202ENST00000377961 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
SCGN-202ENST00000377961 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
SCGN-202ENST00000377961 NESP48681 1621 aa26.01■■□□□ 1.75
SCGN-202ENST00000377961 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
SCGN-202ENST00000377961 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
SCGN-202ENST00000377961 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
SCGN-202ENST00000377961 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
SCGN-202ENST00000377961 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
SCGN-202ENST00000377961 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
SCGN-202ENST00000377961 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
SCGN-202ENST00000377961 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
SCGN-202ENST00000377961 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
SCGN-202ENST00000377961 CUX1P39880 1505 aa25.67■■□□□ 1.7
SCGN-202ENST00000377961 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
SCGN-202ENST00000377961 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
SCGN-202ENST00000377961 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
SCGN-202ENST00000377961 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
SCGN-202ENST00000377961 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
SCGN-202ENST00000377961 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
SCGN-202ENST00000377961 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
SCGN-202ENST00000377961 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
SCGN-202ENST00000377961 WDR62O43379 1518 aa25.46■■□□□ 1.67
SCGN-202ENST00000377961 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
SCGN-202ENST00000377961 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
SCGN-202ENST00000377961 SOGA1O94964 1423 aa25.28■■□□□ 1.64
SCGN-202ENST00000377961 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
SCGN-202ENST00000377961 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
SCGN-202ENST00000377961 CUX2O14529 1486 aa25.24■■□□□ 1.63
SCGN-202ENST00000377961 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
SCGN-202ENST00000377961 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
SCGN-202ENST00000377961 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
SCGN-202ENST00000377961 EEA1Q15075 1411 aa25.22■■□□□ 1.63
SCGN-202ENST00000377961 IFT140Q96RY7 1462 aa25.14■■□□□ 1.62
SCGN-202ENST00000377961 KIF27Q86VH2 1401 aa25.14■■□□□ 1.61
SCGN-202ENST00000377961 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
SCGN-202ENST00000377961 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
SCGN-202ENST00000377961 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
SCGN-202ENST00000377961 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
SCGN-202ENST00000377961 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
SCGN-202ENST00000377961 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
SCGN-202ENST00000377961 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
SCGN-202ENST00000377961 KIF21BO75037 1637 aa24.96■■□□□ 1.59
SCGN-202ENST00000377961 PBRM1Q86U86 1689 aa24.95■■□□□ 1.59
SCGN-202ENST00000377961 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
SCGN-202ENST00000377961 IGF1RP08069 1367 aa24.93■■□□□ 1.58
SCGN-202ENST00000377961 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.58
SCGN-202ENST00000377961 PRXQ9BXM0 1461 aa24.91■■□□□ 1.58
SCGN-202ENST00000377961 CUL7Q14999 1698 aa24.89■■□□□ 1.58
SCGN-202ENST00000377961 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
SCGN-202ENST00000377961 GOLGA3Q08378 1498 aa24.83■■□□□ 1.57
SCGN-202ENST00000377961 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
SCGN-202ENST00000377961 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
SCGN-202ENST00000377961 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
SCGN-202ENST00000377961 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
SCGN-202ENST00000377961 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
SCGN-202ENST00000377961 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
SCGN-202ENST00000377961 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
SCGN-202ENST00000377961 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
SCGN-202ENST00000377961 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
SCGN-202ENST00000377961 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
SCGN-202ENST00000377961 UBTFP17480 764 aaKnown RBP24.58■■□□□ 1.53
SCGN-202ENST00000377961 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
SCGN-202ENST00000377961 CTTNBP2Q8WZ74 1663 aa24.56■■□□□ 1.52
SCGN-202ENST00000377961 CEP162Q5TB80 1403 aa24.5■■□□□ 1.51
SCGN-202ENST00000377961 CHD1O14646 1710 aa24.5■■□□□ 1.51
SCGN-202ENST00000377961 CEP170Q5SW79 1584 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms