RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
CDK2AP1-205ENST00000542174 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
CDK2AP1-205ENST00000542174 ABCC9O60706 1549 aa28.19■■■□□ 2.1
CDK2AP1-205ENST00000542174 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
CDK2AP1-205ENST00000542174 NACADO15069 1562 aa27.01■■□□□ 1.91
CDK2AP1-205ENST00000542174 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
CDK2AP1-205ENST00000542174 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
CDK2AP1-205ENST00000542174 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
CDK2AP1-205ENST00000542174 DCAF1Q9Y4B6 1507 aa26.66■■□□□ 1.86
CDK2AP1-205ENST00000542174 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
CDK2AP1-205ENST00000542174 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
CDK2AP1-205ENST00000542174 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
CDK2AP1-205ENST00000542174 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
CDK2AP1-205ENST00000542174 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.77
CDK2AP1-205ENST00000542174 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
CDK2AP1-205ENST00000542174 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
CDK2AP1-205ENST00000542174 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
CDK2AP1-205ENST00000542174 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
CDK2AP1-205ENST00000542174 CECR2Q9BXF3 1484 aa25.37■■□□□ 1.65
CDK2AP1-205ENST00000542174 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
CDK2AP1-205ENST00000542174 SMARCA4P51532 1647 aa25■■□□□ 1.59
CDK2AP1-205ENST00000542174 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
CDK2AP1-205ENST00000542174 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
CDK2AP1-205ENST00000542174 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
CDK2AP1-205ENST00000542174 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
CDK2AP1-205ENST00000542174 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
CDK2AP1-205ENST00000542174 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
CDK2AP1-205ENST00000542174 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
CDK2AP1-205ENST00000542174 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
CDK2AP1-205ENST00000542174 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
CDK2AP1-205ENST00000542174 WIZO95785 1651 aa24.51■■□□□ 1.51
CDK2AP1-205ENST00000542174 NESP48681 1621 aa24.39■■□□□ 1.49
CDK2AP1-205ENST00000542174 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
CDK2AP1-205ENST00000542174 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
CDK2AP1-205ENST00000542174 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
CDK2AP1-205ENST00000542174 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
CDK2AP1-205ENST00000542174 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
CDK2AP1-205ENST00000542174 CUX2O14529 1486 aa24.16■■□□□ 1.46
CDK2AP1-205ENST00000542174 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
CDK2AP1-205ENST00000542174 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
CDK2AP1-205ENST00000542174 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
CDK2AP1-205ENST00000542174 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
CDK2AP1-205ENST00000542174 CFTRP13569 1480 aa24.04■■□□□ 1.44
CDK2AP1-205ENST00000542174 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
CDK2AP1-205ENST00000542174 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
CDK2AP1-205ENST00000542174 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
CDK2AP1-205ENST00000542174 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
CDK2AP1-205ENST00000542174 WDR62O43379 1518 aa23.85■■□□□ 1.41
CDK2AP1-205ENST00000542174 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
CDK2AP1-205ENST00000542174 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.39
CDK2AP1-205ENST00000542174 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
CDK2AP1-205ENST00000542174 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
CDK2AP1-205ENST00000542174 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
CDK2AP1-205ENST00000542174 DNAJC5Q9H3Z4 198 aa23.65■■□□□ 1.38
CDK2AP1-205ENST00000542174 HRCP23327 699 aa23.56■■□□□ 1.36
CDK2AP1-205ENST00000542174 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
CDK2AP1-205ENST00000542174 EEA1Q15075 1411 aa23.53■■□□□ 1.36
CDK2AP1-205ENST00000542174 TOPBP1Q92547 1522 aa23.51■■□□□ 1.35
CDK2AP1-205ENST00000542174 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
CDK2AP1-205ENST00000542174 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.35
CDK2AP1-205ENST00000542174 IFT140Q96RY7 1462 aa23.39■■□□□ 1.33
CDK2AP1-205ENST00000542174 SOGA1O94964 1423 aa23.38■■□□□ 1.33
CDK2AP1-205ENST00000542174 SYNJ1O43426 1573 aa23.37■■□□□ 1.33
CDK2AP1-205ENST00000542174 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
CDK2AP1-205ENST00000542174 POLA1P09884 1462 aaPredicted RBP23.31■■□□□ 1.32
CDK2AP1-205ENST00000542174 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
CDK2AP1-205ENST00000542174 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
CDK2AP1-205ENST00000542174 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
CDK2AP1-205ENST00000542174 CUX1P39880 1505 aa23.28■■□□□ 1.32
CDK2AP1-205ENST00000542174 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
CDK2AP1-205ENST00000542174 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
CDK2AP1-205ENST00000542174 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
CDK2AP1-205ENST00000542174 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
CDK2AP1-205ENST00000542174 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.31
CDK2AP1-205ENST00000542174 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
CDK2AP1-205ENST00000542174 KIF21BO75037 1637 aa23.2■■□□□ 1.3
CDK2AP1-205ENST00000542174 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
CDK2AP1-205ENST00000542174 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
CDK2AP1-205ENST00000542174 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
CDK2AP1-205ENST00000542174 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDK2AP1-205ENST00000542174 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
CDK2AP1-205ENST00000542174 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
CDK2AP1-205ENST00000542174 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
CDK2AP1-205ENST00000542174 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
CDK2AP1-205ENST00000542174 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
CDK2AP1-205ENST00000542174 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
CDK2AP1-205ENST00000542174 CHD1O14646 1710 aa22.94■■□□□ 1.26
CDK2AP1-205ENST00000542174 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
CDK2AP1-205ENST00000542174 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
CDK2AP1-205ENST00000542174 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
CDK2AP1-205ENST00000542174 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
CDK2AP1-205ENST00000542174 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
CDK2AP1-205ENST00000542174 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
CDK2AP1-205ENST00000542174 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
CDK2AP1-205ENST00000542174 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
CDK2AP1-205ENST00000542174 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
CDK2AP1-205ENST00000542174 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
CDK2AP1-205ENST00000542174 CLIP1P30622 1438 aa22.84■■□□□ 1.25
CDK2AP1-205ENST00000542174 KIF27Q86VH2 1401 aa22.83■■□□□ 1.24
CDK2AP1-205ENST00000542174 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms