RNA–Protein interactions for RNA: ENST00000339431.8

LRRC17-202, Transcript of leucine rich repeat containing 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC17, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC17-202ENST00000339431 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
LRRC17-202ENST00000339431 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
LRRC17-202ENST00000339431 ABCC9O60706 1549 aa27.02■■□□□ 1.92
LRRC17-202ENST00000339431 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
LRRC17-202ENST00000339431 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
LRRC17-202ENST00000339431 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
LRRC17-202ENST00000339431 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.7
LRRC17-202ENST00000339431 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
LRRC17-202ENST00000339431 NACADO15069 1562 aa25.56■■□□□ 1.68
LRRC17-202ENST00000339431 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
LRRC17-202ENST00000339431 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
LRRC17-202ENST00000339431 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
LRRC17-202ENST00000339431 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
LRRC17-202ENST00000339431 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
LRRC17-202ENST00000339431 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
LRRC17-202ENST00000339431 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
LRRC17-202ENST00000339431 HRCP23327 699 aa24.49■■□□□ 1.51
LRRC17-202ENST00000339431 CC2D2AQ9P2K1 1620 aa24.38■■□□□ 1.49
LRRC17-202ENST00000339431 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
LRRC17-202ENST00000339431 EIF4G1Q04637 1599 aaKnown RBP24.31■■□□□ 1.48
LRRC17-202ENST00000339431 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
LRRC17-202ENST00000339431 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
LRRC17-202ENST00000339431 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
LRRC17-202ENST00000339431 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
LRRC17-202ENST00000339431 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
LRRC17-202ENST00000339431 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
LRRC17-202ENST00000339431 PEG3Q9GZU2 1588 aa23.76■■□□□ 1.39
LRRC17-202ENST00000339431 WIZO95785 1651 aa23.71■■□□□ 1.39
LRRC17-202ENST00000339431 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
LRRC17-202ENST00000339431 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
LRRC17-202ENST00000339431 PPARGC1BQ86YN6 1023 aaKnown RBP23.61■■□□□ 1.37
LRRC17-202ENST00000339431 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
LRRC17-202ENST00000339431 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
LRRC17-202ENST00000339431 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
LRRC17-202ENST00000339431 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
LRRC17-202ENST00000339431 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
LRRC17-202ENST00000339431 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
LRRC17-202ENST00000339431 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
LRRC17-202ENST00000339431 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
LRRC17-202ENST00000339431 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
LRRC17-202ENST00000339431 CUX2O14529 1486 aa23.34■■□□□ 1.33
LRRC17-202ENST00000339431 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
LRRC17-202ENST00000339431 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
LRRC17-202ENST00000339431 NESP48681 1621 aa23.18■■□□□ 1.3
LRRC17-202ENST00000339431 TRIM41Q8WV44 630 aa23■■□□□ 1.27
LRRC17-202ENST00000339431 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
LRRC17-202ENST00000339431 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
LRRC17-202ENST00000339431 CFTRP13569 1480 aa22.93■■□□□ 1.26
LRRC17-202ENST00000339431 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
LRRC17-202ENST00000339431 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
LRRC17-202ENST00000339431 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
LRRC17-202ENST00000339431 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
LRRC17-202ENST00000339431 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
LRRC17-202ENST00000339431 MRC2Q9UBG0 1479 aa22.67■■□□□ 1.22
LRRC17-202ENST00000339431 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
LRRC17-202ENST00000339431 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
LRRC17-202ENST00000339431 WDR62O43379 1518 aa22.62■■□□□ 1.21
LRRC17-202ENST00000339431 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
LRRC17-202ENST00000339431 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
LRRC17-202ENST00000339431 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
LRRC17-202ENST00000339431 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
LRRC17-202ENST00000339431 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
LRRC17-202ENST00000339431 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
LRRC17-202ENST00000339431 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
LRRC17-202ENST00000339431 CUX1P39880 1505 aa22.42■■□□□ 1.18
LRRC17-202ENST00000339431 MYT1Q01538 1121 aa22.42■■□□□ 1.18
LRRC17-202ENST00000339431 CCER1Q8TC90 406 aaPredicted RBP22.4■■□□□ 1.18
LRRC17-202ENST00000339431 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.17
LRRC17-202ENST00000339431 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
LRRC17-202ENST00000339431 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
LRRC17-202ENST00000339431 TOPBP1Q92547 1522 aa22.35■■□□□ 1.17
LRRC17-202ENST00000339431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
LRRC17-202ENST00000339431 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
LRRC17-202ENST00000339431 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
LRRC17-202ENST00000339431 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
LRRC17-202ENST00000339431 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
LRRC17-202ENST00000339431 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
LRRC17-202ENST00000339431 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
LRRC17-202ENST00000339431 EEA1Q15075 1411 aa22.18■■□□□ 1.14
LRRC17-202ENST00000339431 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
LRRC17-202ENST00000339431 GTF3C3Q9Y5Q9 886 aa22.14■■□□□ 1.13
LRRC17-202ENST00000339431 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
LRRC17-202ENST00000339431 SOGA1O94964 1423 aa22.13■■□□□ 1.13
LRRC17-202ENST00000339431 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
LRRC17-202ENST00000339431 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
LRRC17-202ENST00000339431 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
LRRC17-202ENST00000339431 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
LRRC17-202ENST00000339431 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
LRRC17-202ENST00000339431 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
LRRC17-202ENST00000339431 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
LRRC17-202ENST00000339431 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
LRRC17-202ENST00000339431 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
LRRC17-202ENST00000339431 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
LRRC17-202ENST00000339431 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
LRRC17-202ENST00000339431 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
LRRC17-202ENST00000339431 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
LRRC17-202ENST00000339431 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
LRRC17-202ENST00000339431 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
LRRC17-202ENST00000339431 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
LRRC17-202ENST00000339431 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms