RNA–Protein interactions for RNA: ENST00000356698.8

RSPO3-201, Transcript of R-spondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO3, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3-201ENST00000356698 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
RSPO3-201ENST00000356698 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
RSPO3-201ENST00000356698 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
RSPO3-201ENST00000356698 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
RSPO3-201ENST00000356698 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
RSPO3-201ENST00000356698 HRCP23327 699 aa24.19■■□□□ 1.46
RSPO3-201ENST00000356698 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
RSPO3-201ENST00000356698 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
RSPO3-201ENST00000356698 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
RSPO3-201ENST00000356698 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
RSPO3-201ENST00000356698 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
RSPO3-201ENST00000356698 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
RSPO3-201ENST00000356698 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
RSPO3-201ENST00000356698 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
RSPO3-201ENST00000356698 ABCC9O60706 1549 aa22.95■■□□□ 1.27
RSPO3-201ENST00000356698 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
RSPO3-201ENST00000356698 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
RSPO3-201ENST00000356698 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
RSPO3-201ENST00000356698 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
RSPO3-201ENST00000356698 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
RSPO3-201ENST00000356698 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
RSPO3-201ENST00000356698 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
RSPO3-201ENST00000356698 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
RSPO3-201ENST00000356698 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
RSPO3-201ENST00000356698 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
RSPO3-201ENST00000356698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
RSPO3-201ENST00000356698 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
RSPO3-201ENST00000356698 CCER1Q8TC90 406 aaPredicted RBP22.33■■□□□ 1.17
RSPO3-201ENST00000356698 WIZO95785 1651 aa22.24■■□□□ 1.15
RSPO3-201ENST00000356698 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
RSPO3-201ENST00000356698 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
RSPO3-201ENST00000356698 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
RSPO3-201ENST00000356698 NACADO15069 1562 aa22.16■■□□□ 1.14
RSPO3-201ENST00000356698 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
RSPO3-201ENST00000356698 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
RSPO3-201ENST00000356698 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
RSPO3-201ENST00000356698 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
RSPO3-201ENST00000356698 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
RSPO3-201ENST00000356698 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
RSPO3-201ENST00000356698 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
RSPO3-201ENST00000356698 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
RSPO3-201ENST00000356698 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
RSPO3-201ENST00000356698 SOGA1O94964 1423 aa21.85■■□□□ 1.09
RSPO3-201ENST00000356698 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
RSPO3-201ENST00000356698 TNIKQ9UKE5 1360 aa21.8■■□□□ 1.08
RSPO3-201ENST00000356698 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
RSPO3-201ENST00000356698 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
RSPO3-201ENST00000356698 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
RSPO3-201ENST00000356698 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
RSPO3-201ENST00000356698 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
RSPO3-201ENST00000356698 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
RSPO3-201ENST00000356698 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
RSPO3-201ENST00000356698 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
RSPO3-201ENST00000356698 EEA1Q15075 1411 aa21.63■■□□□ 1.05
RSPO3-201ENST00000356698 MIER1Q8N108 512 aa21.61■■□□□ 1.05
RSPO3-201ENST00000356698 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
RSPO3-201ENST00000356698 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
RSPO3-201ENST00000356698 MYT1Q01538 1121 aa21.51■■□□□ 1.03
RSPO3-201ENST00000356698 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
RSPO3-201ENST00000356698 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
RSPO3-201ENST00000356698 CLIP1P30622 1438 aa21.42■■□□□ 1.02
RSPO3-201ENST00000356698 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
RSPO3-201ENST00000356698 APLP2Q06481 763 aa21.38■■□□□ 1.01
RSPO3-201ENST00000356698 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
RSPO3-201ENST00000356698 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
RSPO3-201ENST00000356698 KIF21BO75037 1637 aa21.33■■□□□ 1
RSPO3-201ENST00000356698 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
RSPO3-201ENST00000356698 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
RSPO3-201ENST00000356698 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
RSPO3-201ENST00000356698 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
RSPO3-201ENST00000356698 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
RSPO3-201ENST00000356698 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
RSPO3-201ENST00000356698 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
RSPO3-201ENST00000356698 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
RSPO3-201ENST00000356698 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
RSPO3-201ENST00000356698 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
RSPO3-201ENST00000356698 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
RSPO3-201ENST00000356698 ITGAEP38570 1179 aa20.94■□□□□ 0.94
RSPO3-201ENST00000356698 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
RSPO3-201ENST00000356698 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
RSPO3-201ENST00000356698 RRBP1Q9P2E9 1410 aaKnown RBP20.89■□□□□ 0.94
RSPO3-201ENST00000356698 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
RSPO3-201ENST00000356698 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
RSPO3-201ENST00000356698 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
RSPO3-201ENST00000356698 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
RSPO3-201ENST00000356698 CUX2O14529 1486 aa20.79■□□□□ 0.92
RSPO3-201ENST00000356698 BCANQ96GW7 911 aa20.76■□□□□ 0.91
RSPO3-201ENST00000356698 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
RSPO3-201ENST00000356698 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
RSPO3-201ENST00000356698 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
RSPO3-201ENST00000356698 CUX1P39880 1505 aa20.74■□□□□ 0.91
RSPO3-201ENST00000356698 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
RSPO3-201ENST00000356698 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
RSPO3-201ENST00000356698 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
RSPO3-201ENST00000356698 FKBP8Q14318 412 aa20.66■□□□□ 0.9
RSPO3-201ENST00000356698 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
RSPO3-201ENST00000356698 SETD5Q9C0A6 1442 aa20.61■□□□□ 0.89
RSPO3-201ENST00000356698 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
RSPO3-201ENST00000356698 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
RSPO3-201ENST00000356698 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms