RNA–Protein interactions for RNA: ENST00000379692.8

NDNF-201, Transcript of neuron derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDNF, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-201ENST00000379692 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
NDNF-201ENST00000379692 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
NDNF-201ENST00000379692 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
NDNF-201ENST00000379692 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
NDNF-201ENST00000379692 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
NDNF-201ENST00000379692 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
NDNF-201ENST00000379692 MYO15BQ96JP2 1530 aa26.35■■□□□ 1.81
NDNF-201ENST00000379692 NACADO15069 1562 aa25.99■■□□□ 1.75
NDNF-201ENST00000379692 ABCC9O60706 1549 aa25.98■■□□□ 1.75
NDNF-201ENST00000379692 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
NDNF-201ENST00000379692 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
NDNF-201ENST00000379692 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
NDNF-201ENST00000379692 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
NDNF-201ENST00000379692 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
NDNF-201ENST00000379692 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.63
NDNF-201ENST00000379692 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
NDNF-201ENST00000379692 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
NDNF-201ENST00000379692 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
NDNF-201ENST00000379692 WIZO95785 1651 aa24.95■■□□□ 1.59
NDNF-201ENST00000379692 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
NDNF-201ENST00000379692 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
NDNF-201ENST00000379692 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
NDNF-201ENST00000379692 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
NDNF-201ENST00000379692 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
NDNF-201ENST00000379692 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
NDNF-201ENST00000379692 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
NDNF-201ENST00000379692 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
NDNF-201ENST00000379692 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
NDNF-201ENST00000379692 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
NDNF-201ENST00000379692 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
NDNF-201ENST00000379692 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.45
NDNF-201ENST00000379692 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
NDNF-201ENST00000379692 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
NDNF-201ENST00000379692 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
NDNF-201ENST00000379692 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
NDNF-201ENST00000379692 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
NDNF-201ENST00000379692 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
NDNF-201ENST00000379692 EEA1Q15075 1411 aa23.76■■□□□ 1.39
NDNF-201ENST00000379692 SOGA1O94964 1423 aa23.72■■□□□ 1.39
NDNF-201ENST00000379692 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
NDNF-201ENST00000379692 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
NDNF-201ENST00000379692 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
NDNF-201ENST00000379692 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
NDNF-201ENST00000379692 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
NDNF-201ENST00000379692 CFTRP13569 1480 aa23.61■■□□□ 1.37
NDNF-201ENST00000379692 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
NDNF-201ENST00000379692 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
NDNF-201ENST00000379692 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
NDNF-201ENST00000379692 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
NDNF-201ENST00000379692 KIF21BO75037 1637 aa23.51■■□□□ 1.35
NDNF-201ENST00000379692 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
NDNF-201ENST00000379692 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
NDNF-201ENST00000379692 HRCP23327 699 aa23.46■■□□□ 1.35
NDNF-201ENST00000379692 CUX1P39880 1505 aa23.45■■□□□ 1.34
NDNF-201ENST00000379692 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
NDNF-201ENST00000379692 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
NDNF-201ENST00000379692 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
NDNF-201ENST00000379692 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
NDNF-201ENST00000379692 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
NDNF-201ENST00000379692 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
NDNF-201ENST00000379692 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
NDNF-201ENST00000379692 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
NDNF-201ENST00000379692 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
NDNF-201ENST00000379692 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.29
NDNF-201ENST00000379692 CLIP1P30622 1438 aa23.08■■□□□ 1.29
NDNF-201ENST00000379692 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
NDNF-201ENST00000379692 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
NDNF-201ENST00000379692 NESP48681 1621 aa23.02■■□□□ 1.28
NDNF-201ENST00000379692 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
NDNF-201ENST00000379692 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
NDNF-201ENST00000379692 CUX2O14529 1486 aa22.98■■□□□ 1.27
NDNF-201ENST00000379692 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
NDNF-201ENST00000379692 IGF1RP08069 1367 aa22.92■■□□□ 1.26
NDNF-201ENST00000379692 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
NDNF-201ENST00000379692 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.25
NDNF-201ENST00000379692 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
NDNF-201ENST00000379692 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
NDNF-201ENST00000379692 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
NDNF-201ENST00000379692 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
NDNF-201ENST00000379692 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
NDNF-201ENST00000379692 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
NDNF-201ENST00000379692 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
NDNF-201ENST00000379692 CUL7Q14999 1698 aa22.75■■□□□ 1.23
NDNF-201ENST00000379692 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
NDNF-201ENST00000379692 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
NDNF-201ENST00000379692 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
NDNF-201ENST00000379692 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
NDNF-201ENST00000379692 CTTNBP2Q8WZ74 1663 aa22.61■■□□□ 1.21
NDNF-201ENST00000379692 APLP2Q06481 763 aa22.59■■□□□ 1.21
NDNF-201ENST00000379692 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
NDNF-201ENST00000379692 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
NDNF-201ENST00000379692 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
NDNF-201ENST00000379692 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.2
NDNF-201ENST00000379692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
NDNF-201ENST00000379692 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
NDNF-201ENST00000379692 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
NDNF-201ENST00000379692 TIAM1Q13009 1591 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms