RNA–Protein interactions for RNA: ENST00000379692.8

NDNF-201, Transcript of neuron derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDNF, Length 2,885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-201ENST00000379692 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
NDNF-201ENST00000379692 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
NDNF-201ENST00000379692 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
NDNF-201ENST00000379692 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
NDNF-201ENST00000379692 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
NDNF-201ENST00000379692 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
NDNF-201ENST00000379692 MYO15BQ96JP2 1530 aa26.35■■□□□ 1.81
NDNF-201ENST00000379692 NACADO15069 1562 aa25.99■■□□□ 1.75
NDNF-201ENST00000379692 ABCC9O60706 1549 aa25.98■■□□□ 1.75
NDNF-201ENST00000379692 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
NDNF-201ENST00000379692 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
NDNF-201ENST00000379692 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
NDNF-201ENST00000379692 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
NDNF-201ENST00000379692 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
NDNF-201ENST00000379692 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.63
NDNF-201ENST00000379692 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
NDNF-201ENST00000379692 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
NDNF-201ENST00000379692 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
NDNF-201ENST00000379692 WIZO95785 1651 aa24.95■■□□□ 1.59
NDNF-201ENST00000379692 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
NDNF-201ENST00000379692 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
NDNF-201ENST00000379692 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
NDNF-201ENST00000379692 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
NDNF-201ENST00000379692 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
NDNF-201ENST00000379692 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
NDNF-201ENST00000379692 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
NDNF-201ENST00000379692 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
NDNF-201ENST00000379692 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
NDNF-201ENST00000379692 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
NDNF-201ENST00000379692 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
NDNF-201ENST00000379692 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.45
NDNF-201ENST00000379692 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
NDNF-201ENST00000379692 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
NDNF-201ENST00000379692 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
NDNF-201ENST00000379692 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
NDNF-201ENST00000379692 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
NDNF-201ENST00000379692 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
NDNF-201ENST00000379692 EEA1Q15075 1411 aa23.76■■□□□ 1.39
NDNF-201ENST00000379692 SOGA1O94964 1423 aa23.72■■□□□ 1.39
NDNF-201ENST00000379692 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
NDNF-201ENST00000379692 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
NDNF-201ENST00000379692 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
NDNF-201ENST00000379692 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
NDNF-201ENST00000379692 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
NDNF-201ENST00000379692 CFTRP13569 1480 aa23.61■■□□□ 1.37
NDNF-201ENST00000379692 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
NDNF-201ENST00000379692 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
NDNF-201ENST00000379692 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
NDNF-201ENST00000379692 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
NDNF-201ENST00000379692 KIF21BO75037 1637 aa23.51■■□□□ 1.35
NDNF-201ENST00000379692 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
NDNF-201ENST00000379692 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
NDNF-201ENST00000379692 HRCP23327 699 aa23.46■■□□□ 1.35
NDNF-201ENST00000379692 CUX1P39880 1505 aa23.45■■□□□ 1.34
NDNF-201ENST00000379692 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
NDNF-201ENST00000379692 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
NDNF-201ENST00000379692 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
NDNF-201ENST00000379692 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
NDNF-201ENST00000379692 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
NDNF-201ENST00000379692 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
NDNF-201ENST00000379692 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
NDNF-201ENST00000379692 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
NDNF-201ENST00000379692 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
NDNF-201ENST00000379692 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.29
NDNF-201ENST00000379692 CLIP1P30622 1438 aa23.08■■□□□ 1.29
NDNF-201ENST00000379692 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
NDNF-201ENST00000379692 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
NDNF-201ENST00000379692 NESP48681 1621 aa23.02■■□□□ 1.28
NDNF-201ENST00000379692 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
NDNF-201ENST00000379692 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
NDNF-201ENST00000379692 CUX2O14529 1486 aa22.98■■□□□ 1.27
NDNF-201ENST00000379692 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
NDNF-201ENST00000379692 IGF1RP08069 1367 aa22.92■■□□□ 1.26
NDNF-201ENST00000379692 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
NDNF-201ENST00000379692 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.25
NDNF-201ENST00000379692 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
NDNF-201ENST00000379692 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
NDNF-201ENST00000379692 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
NDNF-201ENST00000379692 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
NDNF-201ENST00000379692 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
NDNF-201ENST00000379692 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
NDNF-201ENST00000379692 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
NDNF-201ENST00000379692 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
NDNF-201ENST00000379692 CUL7Q14999 1698 aa22.75■■□□□ 1.23
NDNF-201ENST00000379692 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
NDNF-201ENST00000379692 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
NDNF-201ENST00000379692 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
NDNF-201ENST00000379692 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
NDNF-201ENST00000379692 CTTNBP2Q8WZ74 1663 aa22.61■■□□□ 1.21
NDNF-201ENST00000379692 APLP2Q06481 763 aa22.59■■□□□ 1.21
NDNF-201ENST00000379692 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
NDNF-201ENST00000379692 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
NDNF-201ENST00000379692 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
NDNF-201ENST00000379692 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.2
NDNF-201ENST00000379692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
NDNF-201ENST00000379692 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
NDNF-201ENST00000379692 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
NDNF-201ENST00000379692 TIAM1Q13009 1591 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms