RNA–Protein interactions for RNA: ENST00000582084.1

SSH2-210, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-210ENST00000582084 NISCHQ9Y2I1 1504 aa39.08■■■■□ 3.85
SSH2-210ENST00000582084 CCDC180Q9P1Z9 1646 aa34.93■■■■□ 3.18
SSH2-210ENST00000582084 ABCC9O60706 1549 aa34.9■■■■□ 3.18
SSH2-210ENST00000582084 RB1CC1Q8TDY2 1594 aa33.24■■■□□ 2.91
SSH2-210ENST00000582084 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
SSH2-210ENST00000582084 NACADO15069 1562 aa33.04■■■□□ 2.88
SSH2-210ENST00000582084 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
SSH2-210ENST00000582084 MYO15BQ96JP2 1530 aa32.6■■■□□ 2.81
SSH2-210ENST00000582084 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
SSH2-210ENST00000582084 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
SSH2-210ENST00000582084 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
SSH2-210ENST00000582084 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
SSH2-210ENST00000582084 BICRAQ9NZM4 1560 aa32.23■■■□□ 2.75
SSH2-210ENST00000582084 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
SSH2-210ENST00000582084 SHROOM4Q9ULL8 1493 aa31.79■■■□□ 2.68
SSH2-210ENST00000582084 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
SSH2-210ENST00000582084 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
SSH2-210ENST00000582084 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
SSH2-210ENST00000582084 NCAPD3P42695 1498 aa30.51■■■□□ 2.48
SSH2-210ENST00000582084 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
SSH2-210ENST00000582084 SMARCA4P51532 1647 aa30.42■■■□□ 2.46
SSH2-210ENST00000582084 SMARCA2P51531 1590 aa30.36■■■□□ 2.45
SSH2-210ENST00000582084 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.45
SSH2-210ENST00000582084 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
SSH2-210ENST00000582084 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
SSH2-210ENST00000582084 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
SSH2-210ENST00000582084 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
SSH2-210ENST00000582084 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
SSH2-210ENST00000582084 NESP48681 1621 aa30■■■□□ 2.39
SSH2-210ENST00000582084 CUX2O14529 1486 aa29.96■■■□□ 2.39
SSH2-210ENST00000582084 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
SSH2-210ENST00000582084 LAMC3Q9Y6N6 1575 aa29.78■■■□□ 2.36
SSH2-210ENST00000582084 WIZO95785 1651 aa29.76■■■□□ 2.35
SSH2-210ENST00000582084 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
SSH2-210ENST00000582084 CADPSQ9ULU8 1353 aa29.63■■■□□ 2.33
SSH2-210ENST00000582084 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
SSH2-210ENST00000582084 THOC2Q8NI27 1593 aaKnown RBP29.59■■■□□ 2.33
SSH2-210ENST00000582084 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
SSH2-210ENST00000582084 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
SSH2-210ENST00000582084 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
SSH2-210ENST00000582084 CFTRP13569 1480 aa29.29■■■□□ 2.28
SSH2-210ENST00000582084 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
SSH2-210ENST00000582084 FANCD2Q9BXW9 1451 aa29.28■■■□□ 2.28
SSH2-210ENST00000582084 WDR62O43379 1518 aa29.25■■■□□ 2.27
SSH2-210ENST00000582084 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
SSH2-210ENST00000582084 URB2Q14146 1524 aaKnown RBP29.01■■■□□ 2.23
SSH2-210ENST00000582084 PRDM2Q13029 1718 aa28.92■■■□□ 2.22
SSH2-210ENST00000582084 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
SSH2-210ENST00000582084 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
SSH2-210ENST00000582084 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
SSH2-210ENST00000582084 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
SSH2-210ENST00000582084 ABCC8Q09428 1581 aa28.69■■■□□ 2.18
SSH2-210ENST00000582084 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
SSH2-210ENST00000582084 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
SSH2-210ENST00000582084 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
SSH2-210ENST00000582084 EIF4G3O43432 1585 aaKnown RBP28.45■■■□□ 2.14
SSH2-210ENST00000582084 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.14
SSH2-210ENST00000582084 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
SSH2-210ENST00000582084 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
SSH2-210ENST00000582084 SOGA1O94964 1423 aa28.37■■■□□ 2.13
SSH2-210ENST00000582084 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
SSH2-210ENST00000582084 FBLN2P98095 1184 aa28.31■■■□□ 2.12
SSH2-210ENST00000582084 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
SSH2-210ENST00000582084 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
SSH2-210ENST00000582084 CUX1P39880 1505 aa28.28■■■□□ 2.12
SSH2-210ENST00000582084 RIMBP3CA6NJZ7 1639 aa28.23■■■□□ 2.11
SSH2-210ENST00000582084 RIMBP3BA6NNM3 1639 aa28.23■■■□□ 2.11
SSH2-210ENST00000582084 RIMBP3Q9UFD9 1639 aa28.23■■■□□ 2.11
SSH2-210ENST00000582084 CHD1O14646 1710 aa28.21■■■□□ 2.11
SSH2-210ENST00000582084 ARHGEF11O15085 1522 aa28.17■■■□□ 2.1
SSH2-210ENST00000582084 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
SSH2-210ENST00000582084 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
SSH2-210ENST00000582084 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
SSH2-210ENST00000582084 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
SSH2-210ENST00000582084 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
SSH2-210ENST00000582084 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
SSH2-210ENST00000582084 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
SSH2-210ENST00000582084 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
SSH2-210ENST00000582084 SYNJ2O15056 1496 aa27.95■■■□□ 2.07
SSH2-210ENST00000582084 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
SSH2-210ENST00000582084 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
SSH2-210ENST00000582084 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
SSH2-210ENST00000582084 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
SSH2-210ENST00000582084 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
SSH2-210ENST00000582084 ABCA5Q8WWZ7 1642 aa27.87■■■□□ 2.05
SSH2-210ENST00000582084 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
SSH2-210ENST00000582084 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
SSH2-210ENST00000582084 TRHP20396 242 aaPredicted RBP27.74■■■□□ 2.03
SSH2-210ENST00000582084 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
SSH2-210ENST00000582084 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
SSH2-210ENST00000582084 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
SSH2-210ENST00000582084 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
SSH2-210ENST00000582084 NUP160Q12769 1436 aa27.58■■■□□ 2
SSH2-210ENST00000582084 CEP170Q5SW79 1584 aa27.57■■■□□ 2
SSH2-210ENST00000582084 ERCC6L2Q5T890 1561 aa27.49■■□□□ 1.99
SSH2-210ENST00000582084 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
SSH2-210ENST00000582084 JPH4Q96JJ6 628 aa27.4■■□□□ 1.98
SSH2-210ENST00000582084 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
SSH2-210ENST00000582084 PRG4Q92954 1404 aaPredicted RBP27.37■■□□□ 1.97
SSH2-210ENST00000582084 IGF1RP08069 1367 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms