Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 RABGEF1-205ENST00000450873 2281 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.487e-9■■■□□ 16.7
NKRFO15226 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.757e-9■■■□□ 16.7
NKRFO15226 FLNB-210ENST00000481470 6497 ntTSL 1 (best)10.16□□□□□ -0.787e-9■■■□□ 16.7
NKRFO15226 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.96□□□□□ -0.827e-9■■■□□ 16.7
NKRFO15226 CSNK1E-214ENST00000498529 381 ntTSL 36.63□□□□□ -1.357e-9■■■□□ 16.7
NKRFO15226 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.53■□□□□ 0.563e-6■■■□□ 16.7
NKRFO15226 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC11.9□□□□□ -0.53e-6■■■□□ 16.7
NKRFO15226 EPHA2-202ENST00000461614 875 ntTSL 229.03■■■□□ 2.246e-8■■■□□ 16.7
NKRFO15226 LPCAT1-205ENST00000513757 547 ntTSL 411.54□□□□□ -0.562e-6■■■□□ 16.7
NKRFO15226 CMTM3-206ENST00000563672 460 ntTSL 423.36■■□□□ 1.332e-6■■■□□ 16.7
NKRFO15226 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.97■■□□□ 1.272e-6■■■□□ 16.7
NKRFO15226 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.97■■□□□ 1.272e-6■■■□□ 16.7
NKRFO15226 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.55■■□□□ 1.042e-6■■■□□ 16.7
NKRFO15226 CMTM3-204ENST00000562357 792 ntTSL 420.68■□□□□ 0.92e-6■■■□□ 16.7
NKRFO15226 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.92e-6■■■□□ 16.7
NKRFO15226 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.712e-6■■■□□ 16.7
NKRFO15226 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.712e-6■■■□□ 16.7
NKRFO15226 CMTM3-213ENST00000566756 1950 ntTSL 218.5■□□□□ 0.552e-6■■■□□ 16.7
NKRFO15226 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.522e-6■■■□□ 16.7
NKRFO15226 NAXD-203ENST00000470164 2377 ntTSL 217.56■□□□□ 0.44e-11■■■□□ 16.7
NKRFO15226 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.21■□□□□ 0.354e-11■■■□□ 16.7
NKRFO15226 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.07■□□□□ 0.322e-6■■■□□ 16.7
NKRFO15226 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.234e-11■■■□□ 16.7
NKRFO15226 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC11.66□□□□□ -0.542e-6■■■□□ 16.7
NKRFO15226 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.314e-11■■■□□ 16.7
NKRFO15226 LINC01311-201ENST00000565162 1445 ntBASIC21.33■■□□□ 1.013e-6■■■□□ 16.7
NKRFO15226 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.14■□□□□ 0.492e-6■■■□□ 16.7
NKRFO15226 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.36e-8■■■□□ 16.7
NKRFO15226 SMARCA1-205ENST00000617310 4291 ntTSL 210.65□□□□□ -0.76e-8■■■□□ 16.7
NKRFO15226 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.836e-8■■■□□ 16.7
NKRFO15226 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.886e-8■■■□□ 16.7
NKRFO15226 SMARCA1-204ENST00000478420 561 ntTSL 35.67□□□□□ -1.56e-8■■■□□ 16.7
NKRFO15226 DUSP9-203ENST00000477033 430 ntTSL 323.1■■□□□ 1.292e-7■■■□□ 16.7
NKRFO15226 TFDP1-206ENST00000475254 804 ntTSL 321.61■■□□□ 1.052e-8■■■□□ 16.6
NKRFO15226 TFDP1-204ENST00000464794 447 ntTSL 1 (best)21.4■■□□□ 1.022e-8■■■□□ 16.6
NKRFO15226 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.212e-8■■■□□ 16.6
NKRFO15226 TFDP1-205ENST00000465174 955 ntTSL 315.78■□□□□ 0.122e-8■■■□□ 16.6
NKRFO15226 ARHGEF40-204ENST00000555038 1796 ntTSL 1 (best)23.5■■□□□ 1.355e-9■■■□□ 16.6
NKRFO15226 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.315e-9■■■□□ 16.6
NKRFO15226 ARHGEF40-202ENST00000553709 5204 ntTSL 1 (best)15.73■□□□□ 0.115e-9■■■□□ 16.6
NKRFO15226 ARHGEF40-207ENST00000556399 4902 ntTSL 1 (best)15.61■□□□□ 0.095e-9■■■□□ 16.6
NKRFO15226 ARHGEF40-206ENST00000555232 3902 ntTSL 213.28□□□□□ -0.285e-9■■■□□ 16.6
NKRFO15226 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.543e-6■■■□□ 16.6
NKRFO15226 CCDC85C-205ENST00000556348 556 ntTSL 513.45□□□□□ -0.261e-6■■■□□ 16.6
NKRFO15226 CUX1-220ENST00000607092 559 ntTSL 37.46□□□□□ -1.224e-7■■■□□ 16.6
NKRFO15226 CCDC85C-202ENST00000554877 543 ntTSL 414.28□□□□□ -0.121e-6■■■□□ 16.6
NKRFO15226 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.85■■□□□ 1.892e-7■■■□□ 16.6
NKRFO15226 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.362e-7■■■□□ 16.6
NKRFO15226 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.34e-6■■■□□ 16.6
NKRFO15226 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.434e-6■■■□□ 16.6
NKRFO15226 FGFRL1-206ENST00000512174 571 ntTSL 323.73■■□□□ 1.394e-6■■■□□ 16.6
NKRFO15226 FGFRL1-204ENST00000507339 562 ntTSL 422.06■■□□□ 1.124e-6■■■□□ 16.6
NKRFO15226 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.134e-6■■■□□ 16.6
NKRFO15226 SLC25A36-206ENST00000502756 796 ntTSL 228.31■■■□□ 2.124e-7■■■□□ 16.6
NKRFO15226 SLC25A36-202ENST00000393015 659 ntTSL 522.92■■□□□ 1.264e-7■■■□□ 16.6
NKRFO15226 SLC25A36-214ENST00000515813 738 ntTSL 221.22■□□□□ 0.994e-7■■■□□ 16.6
NKRFO15226 SLC25A36-205ENST00000502594 1163 ntTSL 1 (best)20.63■□□□□ 0.894e-7■■■□□ 16.6
NKRFO15226 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.2■□□□□ 0.664e-7■■■□□ 16.6
NKRFO15226 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.434e-7■■■□□ 16.6
NKRFO15226 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.164e-7■■■□□ 16.6
NKRFO15226 SLC25A36-215ENST00000631654 620 ntTSL 515.91■□□□□ 0.144e-7■■■□□ 16.6
NKRFO15226 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC13.3□□□□□ -0.284e-7■■■□□ 16.6
NKRFO15226 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.392e-7■■■□□ 16.6
NKRFO15226 ANKRD11-212ENST00000567699 412 ntTSL 517.53■□□□□ 0.46e-9■■■□□ 16.6
NKRFO15226 PLEC-215ENST00000532346 316 ntTSL 317.86■□□□□ 0.452e-6■■■□□ 16.6
NKRFO15226 LARP4B-202ENST00000406525 681 ntTSL 531.3■■■□□ 2.61e-14■■■□□ 16.6
NKRFO15226 LARP4B-207ENST00000476529 613 ntTSL 317.25■□□□□ 0.351e-14■■■□□ 16.6
NKRFO15226 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.271e-14■■■□□ 16.6
NKRFO15226 LARP4B-208ENST00000481118 421 ntTSL 313.73□□□□□ -0.211e-14■■■□□ 16.6
NKRFO15226 PQLC1-201ENST00000351365 2414 ntTSL 220.62■□□□□ 0.891e-6■■■□□ 16.5
NKRFO15226 PQLC1-204ENST00000466449 2887 ntTSL 219.17■□□□□ 0.661e-6■■■□□ 16.5
NKRFO15226 LRRC8D-207ENST00000532201 597 ntTSL 412.85□□□□□ -0.352e-7■■■□□ 16.5
NKRFO15226 LRRC8D-203ENST00000414841 666 ntTSL 39.47□□□□□ -0.892e-7■■■□□ 16.5
NKRFO15226 SPON2-207ENST00000504871 581 ntTSL 428.01■■■□□ 2.073e-6■■■□□ 16.5
NKRFO15226 SPON2-212ENST00000509233 549 ntTSL 422.42■■□□□ 1.183e-6■■■□□ 16.5
NKRFO15226 SPON2-215ENST00000511672 557 ntTSL 419.79■□□□□ 0.763e-6■■■□□ 16.5
NKRFO15226 AGXT-202ENST00000470255 2638 ntTSL 219.2■□□□□ 0.665e-7■■■□□ 16.5
NKRFO15226 SPON2-216ENST00000511679 556 ntTSL 517.96■□□□□ 0.473e-6■■■□□ 16.5
NKRFO15226 SPON2-210ENST00000506266 462 ntTSL 414.99□□□□□ -0.013e-6■■■□□ 16.5
NKRFO15226 MBD3-211ENST00000592965 568 ntTSL 427.13■■□□□ 1.931e-6■■■□□ 16.5
NKRFO15226 MBD3-204ENST00000585967 583 ntTSL 419.94■□□□□ 0.781e-6■■■□□ 16.5
NKRFO15226 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.417e-16■■■□□ 16.5
NKRFO15226 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.075e-6■■■□□ 16.5
NKRFO15226 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.45■■□□□ 1.025e-6■■■□□ 16.5
NKRFO15226 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.34■□□□□ 0.055e-6■■■□□ 16.5
NKRFO15226 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-6■■■□□ 16.5
NKRFO15226 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.15e-7■■■□□ 16.5
NKRFO15226 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.095e-7■■■□□ 16.5
NKRFO15226 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.335e-7■■■□□ 16.5
NKRFO15226 CUX1-210ENST00000497815 947 ntTSL 213.47□□□□□ -0.256e-7■■■□□ 16.5
NKRFO15226 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC12.83□□□□□ -0.366e-7■■■□□ 16.5
NKRFO15226 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC12.51□□□□□ -0.416e-7■■■□□ 16.5
NKRFO15226 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC12.04□□□□□ -0.486e-7■■■□□ 16.5
NKRFO15226 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC11.94□□□□□ -0.56e-7■■■□□ 16.5
NKRFO15226 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC11.87□□□□□ -0.516e-7■■■□□ 16.5
NKRFO15226 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC10.7□□□□□ -0.76e-7■■■□□ 16.5
NKRFO15226 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.816e-7■■■□□ 16.5
NKRFO15226 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.151e-6■■■□□ 16.5
NKRFO15226 LRP5L-205ENST00000468442 600 ntTSL 311.75□□□□□ -0.531e-6■■■□□ 16.5
NKRFO15226 CXXC5-209ENST00000507139 472 ntTSL 425.42■■□□□ 1.668e-7■■■□□ 16.5
Retrieved 100 of 9,198 protein–RNA pairs in 96.8 ms