RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
CCDC85C-207ENST00000557769 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
CCDC85C-207ENST00000557769 ABCC9O60706 1549 aa19.03■□□□□ 0.64
CCDC85C-207ENST00000557769 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
CCDC85C-207ENST00000557769 DCAF1Q9Y4B6 1507 aa18.68■□□□□ 0.58
CCDC85C-207ENST00000557769 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
CCDC85C-207ENST00000557769 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
CCDC85C-207ENST00000557769 NACADO15069 1562 aa18.57■□□□□ 0.56
CCDC85C-207ENST00000557769 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
CCDC85C-207ENST00000557769 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
CCDC85C-207ENST00000557769 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
CCDC85C-207ENST00000557769 UNC13AQ9UPW8 1703 aa18.31■□□□□ 0.52
CCDC85C-207ENST00000557769 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
CCDC85C-207ENST00000557769 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
CCDC85C-207ENST00000557769 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
CCDC85C-207ENST00000557769 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
CCDC85C-207ENST00000557769 HRCP23327 699 aa17.85■□□□□ 0.45
CCDC85C-207ENST00000557769 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
CCDC85C-207ENST00000557769 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC85C-207ENST00000557769 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
CCDC85C-207ENST00000557769 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
CCDC85C-207ENST00000557769 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
CCDC85C-207ENST00000557769 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
CCDC85C-207ENST00000557769 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
CCDC85C-207ENST00000557769 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
CCDC85C-207ENST00000557769 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
CCDC85C-207ENST00000557769 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
CCDC85C-207ENST00000557769 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.36
CCDC85C-207ENST00000557769 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
CCDC85C-207ENST00000557769 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
CCDC85C-207ENST00000557769 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
CCDC85C-207ENST00000557769 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
CCDC85C-207ENST00000557769 WIZO95785 1651 aa17.24■□□□□ 0.35
CCDC85C-207ENST00000557769 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
CCDC85C-207ENST00000557769 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
CCDC85C-207ENST00000557769 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
CCDC85C-207ENST00000557769 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
CCDC85C-207ENST00000557769 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
CCDC85C-207ENST00000557769 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
CCDC85C-207ENST00000557769 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
CCDC85C-207ENST00000557769 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
CCDC85C-207ENST00000557769 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
CCDC85C-207ENST00000557769 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.3
CCDC85C-207ENST00000557769 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
CCDC85C-207ENST00000557769 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
CCDC85C-207ENST00000557769 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
CCDC85C-207ENST00000557769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
CCDC85C-207ENST00000557769 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
CCDC85C-207ENST00000557769 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
CCDC85C-207ENST00000557769 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
CCDC85C-207ENST00000557769 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
CCDC85C-207ENST00000557769 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
CCDC85C-207ENST00000557769 NESP48681 1621 aa16.65■□□□□ 0.26
CCDC85C-207ENST00000557769 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
CCDC85C-207ENST00000557769 CFTRP13569 1480 aa16.64■□□□□ 0.25
CCDC85C-207ENST00000557769 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
CCDC85C-207ENST00000557769 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CCDC85C-207ENST00000557769 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
CCDC85C-207ENST00000557769 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
CCDC85C-207ENST00000557769 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
CCDC85C-207ENST00000557769 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
CCDC85C-207ENST00000557769 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
CCDC85C-207ENST00000557769 MYT1Q01538 1121 aa16.4■□□□□ 0.22
CCDC85C-207ENST00000557769 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
CCDC85C-207ENST00000557769 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
CCDC85C-207ENST00000557769 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
CCDC85C-207ENST00000557769 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
CCDC85C-207ENST00000557769 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
CCDC85C-207ENST00000557769 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
CCDC85C-207ENST00000557769 WDR62O43379 1518 aa16.3■□□□□ 0.2
CCDC85C-207ENST00000557769 CUX1P39880 1505 aa16.28■□□□□ 0.2
CCDC85C-207ENST00000557769 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
CCDC85C-207ENST00000557769 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
CCDC85C-207ENST00000557769 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
CCDC85C-207ENST00000557769 SYNJ1O43426 1573 aa16.27■□□□□ 0.19
CCDC85C-207ENST00000557769 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
CCDC85C-207ENST00000557769 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
CCDC85C-207ENST00000557769 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
CCDC85C-207ENST00000557769 APLP2Q06481 763 aa16.23■□□□□ 0.19
CCDC85C-207ENST00000557769 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CCDC85C-207ENST00000557769 BCANQ96GW7 911 aa16.16■□□□□ 0.18
CCDC85C-207ENST00000557769 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
CCDC85C-207ENST00000557769 CUX2O14529 1486 aa16.14■□□□□ 0.18
CCDC85C-207ENST00000557769 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
CCDC85C-207ENST00000557769 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
CCDC85C-207ENST00000557769 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
CCDC85C-207ENST00000557769 MIER1Q8N108 512 aa16.11■□□□□ 0.17
CCDC85C-207ENST00000557769 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
CCDC85C-207ENST00000557769 ITGAEP38570 1179 aa16.05■□□□□ 0.16
CCDC85C-207ENST00000557769 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
CCDC85C-207ENST00000557769 IFT140Q96RY7 1462 aa16■□□□□ 0.15
CCDC85C-207ENST00000557769 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
CCDC85C-207ENST00000557769 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
CCDC85C-207ENST00000557769 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
CCDC85C-207ENST00000557769 SOGA1O94964 1423 aa15.97■□□□□ 0.15
CCDC85C-207ENST00000557769 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
CCDC85C-207ENST00000557769 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
CCDC85C-207ENST00000557769 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
CCDC85C-207ENST00000557769 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
CCDC85C-207ENST00000557769 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.137e-6■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms