RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 NISCHQ9Y2I1 1504 aa28.76■■■□□ 2.19
CCDC85C-205ENST00000556348 ABCC9O60706 1549 aa26.24■■□□□ 1.79
CCDC85C-205ENST00000556348 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
CCDC85C-205ENST00000556348 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
CCDC85C-205ENST00000556348 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
CCDC85C-205ENST00000556348 NACADO15069 1562 aa24.59■■□□□ 1.53
CCDC85C-205ENST00000556348 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
CCDC85C-205ENST00000556348 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
CCDC85C-205ENST00000556348 UNC13AQ9UPW8 1703 aa24.21■■□□□ 1.47
CCDC85C-205ENST00000556348 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
CCDC85C-205ENST00000556348 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
CCDC85C-205ENST00000556348 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
CCDC85C-205ENST00000556348 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
CCDC85C-205ENST00000556348 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.38
CCDC85C-205ENST00000556348 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
CCDC85C-205ENST00000556348 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
CCDC85C-205ENST00000556348 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
CCDC85C-205ENST00000556348 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
CCDC85C-205ENST00000556348 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
CCDC85C-205ENST00000556348 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
CCDC85C-205ENST00000556348 CUX2O14529 1486 aa22.7■■□□□ 1.22
CCDC85C-205ENST00000556348 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
CCDC85C-205ENST00000556348 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
CCDC85C-205ENST00000556348 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
CCDC85C-205ENST00000556348 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
CCDC85C-205ENST00000556348 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
CCDC85C-205ENST00000556348 NESP48681 1621 aa22.45■■□□□ 1.18
CCDC85C-205ENST00000556348 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
CCDC85C-205ENST00000556348 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
CCDC85C-205ENST00000556348 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
CCDC85C-205ENST00000556348 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
CCDC85C-205ENST00000556348 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
CCDC85C-205ENST00000556348 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
CCDC85C-205ENST00000556348 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
CCDC85C-205ENST00000556348 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
CCDC85C-205ENST00000556348 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
CCDC85C-205ENST00000556348 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
CCDC85C-205ENST00000556348 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
CCDC85C-205ENST00000556348 WIZO95785 1651 aa21.89■■□□□ 1.1
CCDC85C-205ENST00000556348 WDR62O43379 1518 aa21.87■■□□□ 1.09
CCDC85C-205ENST00000556348 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
CCDC85C-205ENST00000556348 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
CCDC85C-205ENST00000556348 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
CCDC85C-205ENST00000556348 CFTRP13569 1480 aa21.69■■□□□ 1.06
CCDC85C-205ENST00000556348 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
CCDC85C-205ENST00000556348 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
CCDC85C-205ENST00000556348 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
CCDC85C-205ENST00000556348 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CCDC85C-205ENST00000556348 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
CCDC85C-205ENST00000556348 ZNF608Q9ULD9 1512 aaPredicted RBP21.38■■□□□ 1.01
CCDC85C-205ENST00000556348 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
CCDC85C-205ENST00000556348 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
CCDC85C-205ENST00000556348 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
CCDC85C-205ENST00000556348 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
CCDC85C-205ENST00000556348 TOPBP1Q92547 1522 aa21.31■■□□□ 1
CCDC85C-205ENST00000556348 ARHGEF11O15085 1522 aa21.27■■□□□ 1
CCDC85C-205ENST00000556348 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
CCDC85C-205ENST00000556348 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
CCDC85C-205ENST00000556348 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
CCDC85C-205ENST00000556348 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
CCDC85C-205ENST00000556348 FBLN2P98095 1184 aa21.19■□□□□ 0.98
CCDC85C-205ENST00000556348 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.987e-6■■□□□ 13.1
CCDC85C-205ENST00000556348 CHD1O14646 1710 aa21.12■□□□□ 0.97
CCDC85C-205ENST00000556348 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
CCDC85C-205ENST00000556348 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
CCDC85C-205ENST00000556348 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
CCDC85C-205ENST00000556348 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
CCDC85C-205ENST00000556348 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
CCDC85C-205ENST00000556348 SOGA1O94964 1423 aa21.03■□□□□ 0.96
CCDC85C-205ENST00000556348 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
CCDC85C-205ENST00000556348 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
CCDC85C-205ENST00000556348 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
CCDC85C-205ENST00000556348 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
CCDC85C-205ENST00000556348 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
CCDC85C-205ENST00000556348 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
CCDC85C-205ENST00000556348 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
CCDC85C-205ENST00000556348 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
CCDC85C-205ENST00000556348 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
CCDC85C-205ENST00000556348 CUX1P39880 1505 aa20.83■□□□□ 0.93
CCDC85C-205ENST00000556348 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
CCDC85C-205ENST00000556348 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
CCDC85C-205ENST00000556348 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
CCDC85C-205ENST00000556348 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
CCDC85C-205ENST00000556348 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
CCDC85C-205ENST00000556348 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
CCDC85C-205ENST00000556348 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
CCDC85C-205ENST00000556348 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
CCDC85C-205ENST00000556348 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.889e-6■■■■■ 50.1
CCDC85C-205ENST00000556348 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
CCDC85C-205ENST00000556348 NUP160Q12769 1436 aa20.49■□□□□ 0.87
CCDC85C-205ENST00000556348 ADAMTS12P58397 1594 aa20.49■□□□□ 0.87
CCDC85C-205ENST00000556348 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
CCDC85C-205ENST00000556348 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
CCDC85C-205ENST00000556348 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
CCDC85C-205ENST00000556348 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
CCDC85C-205ENST00000556348 SHROOM2Q13796 1616 aa20.4■□□□□ 0.86
CCDC85C-205ENST00000556348 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
CCDC85C-205ENST00000556348 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
CCDC85C-205ENST00000556348 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
CCDC85C-205ENST00000556348 NPM1P06748 294 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms