RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
CCDC85C-202ENST00000554877 ABCC9O60706 1549 aa26.89■■□□□ 1.89
CCDC85C-202ENST00000554877 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
CCDC85C-202ENST00000554877 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
CCDC85C-202ENST00000554877 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
CCDC85C-202ENST00000554877 NACADO15069 1562 aa25.35■■□□□ 1.65
CCDC85C-202ENST00000554877 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
CCDC85C-202ENST00000554877 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
CCDC85C-202ENST00000554877 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
CCDC85C-202ENST00000554877 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
CCDC85C-202ENST00000554877 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
CCDC85C-202ENST00000554877 DCAF1Q9Y4B6 1507 aa24.75■■□□□ 1.55
CCDC85C-202ENST00000554877 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
CCDC85C-202ENST00000554877 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
CCDC85C-202ENST00000554877 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
CCDC85C-202ENST00000554877 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
CCDC85C-202ENST00000554877 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
CCDC85C-202ENST00000554877 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
CCDC85C-202ENST00000554877 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
CCDC85C-202ENST00000554877 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
CCDC85C-202ENST00000554877 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
CCDC85C-202ENST00000554877 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
CCDC85C-202ENST00000554877 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
CCDC85C-202ENST00000554877 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
CCDC85C-202ENST00000554877 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
CCDC85C-202ENST00000554877 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
CCDC85C-202ENST00000554877 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
CCDC85C-202ENST00000554877 NESP48681 1621 aa23.13■■□□□ 1.29
CCDC85C-202ENST00000554877 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
CCDC85C-202ENST00000554877 WIZO95785 1651 aa22.99■■□□□ 1.27
CCDC85C-202ENST00000554877 CUX2O14529 1486 aa22.92■■□□□ 1.26
CCDC85C-202ENST00000554877 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
CCDC85C-202ENST00000554877 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
CCDC85C-202ENST00000554877 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
CCDC85C-202ENST00000554877 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
CCDC85C-202ENST00000554877 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
CCDC85C-202ENST00000554877 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
CCDC85C-202ENST00000554877 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
CCDC85C-202ENST00000554877 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
CCDC85C-202ENST00000554877 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
CCDC85C-202ENST00000554877 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
CCDC85C-202ENST00000554877 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
CCDC85C-202ENST00000554877 CFTRP13569 1480 aa22.54■■□□□ 1.2
CCDC85C-202ENST00000554877 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
CCDC85C-202ENST00000554877 WDR62O43379 1518 aa22.43■■□□□ 1.18
CCDC85C-202ENST00000554877 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
CCDC85C-202ENST00000554877 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
CCDC85C-202ENST00000554877 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
CCDC85C-202ENST00000554877 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
CCDC85C-202ENST00000554877 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
CCDC85C-202ENST00000554877 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
CCDC85C-202ENST00000554877 IFT140Q96RY7 1462 aa22.08■■□□□ 1.12
CCDC85C-202ENST00000554877 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
CCDC85C-202ENST00000554877 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
CCDC85C-202ENST00000554877 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
CCDC85C-202ENST00000554877 FBLN2P98095 1184 aa21.96■■□□□ 1.11
CCDC85C-202ENST00000554877 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.117e-6■■□□□ 13.1
CCDC85C-202ENST00000554877 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
CCDC85C-202ENST00000554877 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
CCDC85C-202ENST00000554877 SOGA1O94964 1423 aa21.91■■□□□ 1.1
CCDC85C-202ENST00000554877 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
CCDC85C-202ENST00000554877 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
CCDC85C-202ENST00000554877 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
CCDC85C-202ENST00000554877 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
CCDC85C-202ENST00000554877 CUX1P39880 1505 aa21.82■■□□□ 1.08
CCDC85C-202ENST00000554877 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
CCDC85C-202ENST00000554877 CHD1O14646 1710 aa21.67■■□□□ 1.06
CCDC85C-202ENST00000554877 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
CCDC85C-202ENST00000554877 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
CCDC85C-202ENST00000554877 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
CCDC85C-202ENST00000554877 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
CCDC85C-202ENST00000554877 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
CCDC85C-202ENST00000554877 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
CCDC85C-202ENST00000554877 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
CCDC85C-202ENST00000554877 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
CCDC85C-202ENST00000554877 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.059e-6■■■■■ 50.1
CCDC85C-202ENST00000554877 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
CCDC85C-202ENST00000554877 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
CCDC85C-202ENST00000554877 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
CCDC85C-202ENST00000554877 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
CCDC85C-202ENST00000554877 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
CCDC85C-202ENST00000554877 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CCDC85C-202ENST00000554877 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
CCDC85C-202ENST00000554877 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
CCDC85C-202ENST00000554877 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
CCDC85C-202ENST00000554877 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
CCDC85C-202ENST00000554877 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
CCDC85C-202ENST00000554877 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
CCDC85C-202ENST00000554877 GRIN2AQ12879 1464 aa21.32■■□□□ 1
CCDC85C-202ENST00000554877 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
CCDC85C-202ENST00000554877 ADAMTS12P58397 1594 aa21.28■■□□□ 1
CCDC85C-202ENST00000554877 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
CCDC85C-202ENST00000554877 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
CCDC85C-202ENST00000554877 NUP160Q12769 1436 aa21.21■□□□□ 0.99
CCDC85C-202ENST00000554877 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
CCDC85C-202ENST00000554877 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
CCDC85C-202ENST00000554877 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
CCDC85C-202ENST00000554877 IGF1RP08069 1367 aa21.16■□□□□ 0.98
CCDC85C-202ENST00000554877 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
CCDC85C-202ENST00000554877 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms