RNA–Protein interactions for RNA: ENST00000532201.5

LRRC8D-207, Transcript of leucine rich repeat containing 8 VRAC subunit D, humanhuman

TSL 4

Gene LRRC8D, Length 597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8D-207ENST00000532201 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
LRRC8D-207ENST00000532201 ABCC9O60706 1549 aa25.68■■□□□ 1.7
LRRC8D-207ENST00000532201 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
LRRC8D-207ENST00000532201 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.53
LRRC8D-207ENST00000532201 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
LRRC8D-207ENST00000532201 NACADO15069 1562 aa23.9■■□□□ 1.42
LRRC8D-207ENST00000532201 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
LRRC8D-207ENST00000532201 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
LRRC8D-207ENST00000532201 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
LRRC8D-207ENST00000532201 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
LRRC8D-207ENST00000532201 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
LRRC8D-207ENST00000532201 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
LRRC8D-207ENST00000532201 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
LRRC8D-207ENST00000532201 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
LRRC8D-207ENST00000532201 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
LRRC8D-207ENST00000532201 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
LRRC8D-207ENST00000532201 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
LRRC8D-207ENST00000532201 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
LRRC8D-207ENST00000532201 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
LRRC8D-207ENST00000532201 CUX2O14529 1486 aa22.28■■□□□ 1.16
LRRC8D-207ENST00000532201 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
LRRC8D-207ENST00000532201 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
LRRC8D-207ENST00000532201 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
LRRC8D-207ENST00000532201 NESP48681 1621 aa21.93■■□□□ 1.1
LRRC8D-207ENST00000532201 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
LRRC8D-207ENST00000532201 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
LRRC8D-207ENST00000532201 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
LRRC8D-207ENST00000532201 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
LRRC8D-207ENST00000532201 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
LRRC8D-207ENST00000532201 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
LRRC8D-207ENST00000532201 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
LRRC8D-207ENST00000532201 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
LRRC8D-207ENST00000532201 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
LRRC8D-207ENST00000532201 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
LRRC8D-207ENST00000532201 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
LRRC8D-207ENST00000532201 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
LRRC8D-207ENST00000532201 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
LRRC8D-207ENST00000532201 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
LRRC8D-207ENST00000532201 WDR62O43379 1518 aa21.34■■□□□ 1.01
LRRC8D-207ENST00000532201 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
LRRC8D-207ENST00000532201 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
LRRC8D-207ENST00000532201 WIZO95785 1651 aa21.17■□□□□ 0.98
LRRC8D-207ENST00000532201 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
LRRC8D-207ENST00000532201 CFTRP13569 1480 aa21.06■□□□□ 0.96
LRRC8D-207ENST00000532201 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
LRRC8D-207ENST00000532201 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
LRRC8D-207ENST00000532201 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
LRRC8D-207ENST00000532201 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
LRRC8D-207ENST00000532201 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
LRRC8D-207ENST00000532201 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
LRRC8D-207ENST00000532201 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
LRRC8D-207ENST00000532201 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
LRRC8D-207ENST00000532201 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
LRRC8D-207ENST00000532201 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
LRRC8D-207ENST00000532201 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
LRRC8D-207ENST00000532201 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
LRRC8D-207ENST00000532201 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
LRRC8D-207ENST00000532201 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
LRRC8D-207ENST00000532201 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
LRRC8D-207ENST00000532201 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
LRRC8D-207ENST00000532201 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.896e-6■■■■□ 23.2
LRRC8D-207ENST00000532201 CHD1O14646 1710 aa20.61■□□□□ 0.89
LRRC8D-207ENST00000532201 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
LRRC8D-207ENST00000532201 FBLN2P98095 1184 aa20.6■□□□□ 0.89
LRRC8D-207ENST00000532201 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
LRRC8D-207ENST00000532201 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
LRRC8D-207ENST00000532201 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
LRRC8D-207ENST00000532201 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
LRRC8D-207ENST00000532201 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
LRRC8D-207ENST00000532201 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
LRRC8D-207ENST00000532201 SOGA1O94964 1423 aa20.38■□□□□ 0.85
LRRC8D-207ENST00000532201 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
LRRC8D-207ENST00000532201 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
LRRC8D-207ENST00000532201 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
LRRC8D-207ENST00000532201 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
LRRC8D-207ENST00000532201 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
LRRC8D-207ENST00000532201 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
LRRC8D-207ENST00000532201 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
LRRC8D-207ENST00000532201 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
LRRC8D-207ENST00000532201 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
LRRC8D-207ENST00000532201 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
LRRC8D-207ENST00000532201 CUX1P39880 1505 aa20.17■□□□□ 0.82
LRRC8D-207ENST00000532201 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
LRRC8D-207ENST00000532201 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
LRRC8D-207ENST00000532201 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
LRRC8D-207ENST00000532201 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
LRRC8D-207ENST00000532201 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
LRRC8D-207ENST00000532201 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
LRRC8D-207ENST00000532201 NUP160Q12769 1436 aa19.93■□□□□ 0.78
LRRC8D-207ENST00000532201 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
LRRC8D-207ENST00000532201 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
LRRC8D-207ENST00000532201 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
LRRC8D-207ENST00000532201 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.771e-13■■■■■ 64
LRRC8D-207ENST00000532201 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.76
LRRC8D-207ENST00000532201 PRG4Q92954 1404 aaPredicted RBP19.79■□□□□ 0.76
LRRC8D-207ENST00000532201 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
LRRC8D-207ENST00000532201 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
LRRC8D-207ENST00000532201 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
LRRC8D-207ENST00000532201 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
LRRC8D-207ENST00000532201 KDM4FA0A1W2PPD8 638 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms