RNA–Protein interactions for RNA: ENST00000414841.1

LRRC8D-203, Transcript of leucine rich repeat containing 8 VRAC subunit D, humanhuman

TSL 3

Gene LRRC8D, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8D-203ENST00000414841 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
LRRC8D-203ENST00000414841 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
LRRC8D-203ENST00000414841 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
LRRC8D-203ENST00000414841 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
LRRC8D-203ENST00000414841 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
LRRC8D-203ENST00000414841 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
LRRC8D-203ENST00000414841 FOXD1Q16676 465 aa19.02■□□□□ 0.64
LRRC8D-203ENST00000414841 ABCC9O60706 1549 aa18.47■□□□□ 0.55
LRRC8D-203ENST00000414841 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
LRRC8D-203ENST00000414841 ADRA2BP18089 450 aa18.41■□□□□ 0.54
LRRC8D-203ENST00000414841 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
LRRC8D-203ENST00000414841 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
LRRC8D-203ENST00000414841 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
LRRC8D-203ENST00000414841 MSH5O43196 834 aa17.46■□□□□ 0.39
LRRC8D-203ENST00000414841 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
LRRC8D-203ENST00000414841 NACADO15069 1562 aa17.28■□□□□ 0.36
LRRC8D-203ENST00000414841 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
LRRC8D-203ENST00000414841 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
LRRC8D-203ENST00000414841 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
LRRC8D-203ENST00000414841 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
LRRC8D-203ENST00000414841 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
LRRC8D-203ENST00000414841 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
LRRC8D-203ENST00000414841 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
LRRC8D-203ENST00000414841 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
LRRC8D-203ENST00000414841 KCNA4P22459 653 aa16.86■□□□□ 0.29
LRRC8D-203ENST00000414841 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
LRRC8D-203ENST00000414841 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
LRRC8D-203ENST00000414841 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
LRRC8D-203ENST00000414841 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
LRRC8D-203ENST00000414841 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
LRRC8D-203ENST00000414841 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
LRRC8D-203ENST00000414841 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
LRRC8D-203ENST00000414841 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
LRRC8D-203ENST00000414841 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
LRRC8D-203ENST00000414841 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
LRRC8D-203ENST00000414841 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
LRRC8D-203ENST00000414841 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
LRRC8D-203ENST00000414841 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
LRRC8D-203ENST00000414841 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
LRRC8D-203ENST00000414841 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
LRRC8D-203ENST00000414841 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
LRRC8D-203ENST00000414841 CUX2O14529 1486 aa16■□□□□ 0.15
LRRC8D-203ENST00000414841 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
LRRC8D-203ENST00000414841 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
LRRC8D-203ENST00000414841 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
LRRC8D-203ENST00000414841 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
LRRC8D-203ENST00000414841 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
LRRC8D-203ENST00000414841 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
LRRC8D-203ENST00000414841 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
LRRC8D-203ENST00000414841 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
LRRC8D-203ENST00000414841 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
LRRC8D-203ENST00000414841 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
LRRC8D-203ENST00000414841 NESP48681 1621 aa15.74■□□□□ 0.11
LRRC8D-203ENST00000414841 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
LRRC8D-203ENST00000414841 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
LRRC8D-203ENST00000414841 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
LRRC8D-203ENST00000414841 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
LRRC8D-203ENST00000414841 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
LRRC8D-203ENST00000414841 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
LRRC8D-203ENST00000414841 ZBTB22O15209 634 aa15.53■□□□□ 0.08
LRRC8D-203ENST00000414841 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
LRRC8D-203ENST00000414841 WIZO95785 1651 aa15.5■□□□□ 0.07
LRRC8D-203ENST00000414841 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
LRRC8D-203ENST00000414841 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
LRRC8D-203ENST00000414841 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
LRRC8D-203ENST00000414841 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
LRRC8D-203ENST00000414841 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
LRRC8D-203ENST00000414841 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
LRRC8D-203ENST00000414841 WDR62O43379 1518 aa15.35■□□□□ 0.05
LRRC8D-203ENST00000414841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRRC8D-203ENST00000414841 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
LRRC8D-203ENST00000414841 CFTRP13569 1480 aa15.31■□□□□ 0.04
LRRC8D-203ENST00000414841 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
LRRC8D-203ENST00000414841 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
LRRC8D-203ENST00000414841 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
LRRC8D-203ENST00000414841 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
LRRC8D-203ENST00000414841 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
LRRC8D-203ENST00000414841 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
LRRC8D-203ENST00000414841 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
LRRC8D-203ENST00000414841 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
LRRC8D-203ENST00000414841 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
LRRC8D-203ENST00000414841 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
LRRC8D-203ENST00000414841 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
LRRC8D-203ENST00000414841 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
LRRC8D-203ENST00000414841 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
LRRC8D-203ENST00000414841 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
LRRC8D-203ENST00000414841 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
LRRC8D-203ENST00000414841 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
LRRC8D-203ENST00000414841 IFT140Q96RY7 1462 aa15□□□□□ -0.01
LRRC8D-203ENST00000414841 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
LRRC8D-203ENST00000414841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
LRRC8D-203ENST00000414841 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
LRRC8D-203ENST00000414841 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
LRRC8D-203ENST00000414841 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
LRRC8D-203ENST00000414841 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
LRRC8D-203ENST00000414841 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
LRRC8D-203ENST00000414841 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
LRRC8D-203ENST00000414841 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
LRRC8D-203ENST00000414841 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.036e-6■■■■□ 23.2
LRRC8D-203ENST00000414841 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms