Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 LTBR-211ENST00000543190 785 ntTSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.76□□□□□ -0.69
TMEM238C9JI98 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM238C9JI98 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM238C9JI98 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AL031133.1-201ENST00000406807 723 ntBASIC10.75□□□□□ -0.69
TMEM238C9JI98 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.75□□□□□ -0.69
TMEM238C9JI98 AC005332.1-201ENST00000577698 1310 ntBASIC10.75□□□□□ -0.69
TMEM238C9JI98 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM238C9JI98 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms