RNA–Protein interactions for RNA: ENST00000342435.8

PLSCR1-201, Transcript of phospholipid scramblase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLSCR1, Length 2,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-201ENST00000342435 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
PLSCR1-201ENST00000342435 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
PLSCR1-201ENST00000342435 MYT1Q01538 1121 aa20.52■□□□□ 0.88
PLSCR1-201ENST00000342435 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
PLSCR1-201ENST00000342435 HRCP23327 699 aa20.18■□□□□ 0.82
PLSCR1-201ENST00000342435 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
PLSCR1-201ENST00000342435 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
PLSCR1-201ENST00000342435 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
PLSCR1-201ENST00000342435 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
PLSCR1-201ENST00000342435 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
PLSCR1-201ENST00000342435 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
PLSCR1-201ENST00000342435 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
PLSCR1-201ENST00000342435 SUPT5HO00267 1087 aaKnown RBP19.47■□□□□ 0.71
PLSCR1-201ENST00000342435 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
PLSCR1-201ENST00000342435 ABCC9O60706 1549 aa19.37■□□□□ 0.69
PLSCR1-201ENST00000342435 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
PLSCR1-201ENST00000342435 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
PLSCR1-201ENST00000342435 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
PLSCR1-201ENST00000342435 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
PLSCR1-201ENST00000342435 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
PLSCR1-201ENST00000342435 NACADO15069 1562 aa18.9■□□□□ 0.62
PLSCR1-201ENST00000342435 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
PLSCR1-201ENST00000342435 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
PLSCR1-201ENST00000342435 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
PLSCR1-201ENST00000342435 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
PLSCR1-201ENST00000342435 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
PLSCR1-201ENST00000342435 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
PLSCR1-201ENST00000342435 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
PLSCR1-201ENST00000342435 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
PLSCR1-201ENST00000342435 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
PLSCR1-201ENST00000342435 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
PLSCR1-201ENST00000342435 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
PLSCR1-201ENST00000342435 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
PLSCR1-201ENST00000342435 APLP2Q06481 763 aa18.37■□□□□ 0.53
PLSCR1-201ENST00000342435 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
PLSCR1-201ENST00000342435 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
PLSCR1-201ENST00000342435 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
PLSCR1-201ENST00000342435 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
PLSCR1-201ENST00000342435 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
PLSCR1-201ENST00000342435 WIZO95785 1651 aa18.22■□□□□ 0.51
PLSCR1-201ENST00000342435 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
PLSCR1-201ENST00000342435 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
PLSCR1-201ENST00000342435 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
PLSCR1-201ENST00000342435 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
PLSCR1-201ENST00000342435 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
PLSCR1-201ENST00000342435 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
PLSCR1-201ENST00000342435 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.48
PLSCR1-201ENST00000342435 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
PLSCR1-201ENST00000342435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
PLSCR1-201ENST00000342435 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
PLSCR1-201ENST00000342435 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
PLSCR1-201ENST00000342435 EEA1Q15075 1411 aa17.81■□□□□ 0.44
PLSCR1-201ENST00000342435 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
PLSCR1-201ENST00000342435 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
PLSCR1-201ENST00000342435 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.44
PLSCR1-201ENST00000342435 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
PLSCR1-201ENST00000342435 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
PLSCR1-201ENST00000342435 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
PLSCR1-201ENST00000342435 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
PLSCR1-201ENST00000342435 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
PLSCR1-201ENST00000342435 MIER1Q8N108 512 aa17.62■□□□□ 0.41
PLSCR1-201ENST00000342435 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
PLSCR1-201ENST00000342435 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
PLSCR1-201ENST00000342435 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
PLSCR1-201ENST00000342435 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
PLSCR1-201ENST00000342435 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
PLSCR1-201ENST00000342435 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
PLSCR1-201ENST00000342435 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
PLSCR1-201ENST00000342435 KIF21BO75037 1637 aa17.48■□□□□ 0.39
PLSCR1-201ENST00000342435 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
PLSCR1-201ENST00000342435 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
PLSCR1-201ENST00000342435 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
PLSCR1-201ENST00000342435 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
PLSCR1-201ENST00000342435 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
PLSCR1-201ENST00000342435 SOGA1O94964 1423 aa17.35■□□□□ 0.37
PLSCR1-201ENST00000342435 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.37
PLSCR1-201ENST00000342435 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
PLSCR1-201ENST00000342435 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
PLSCR1-201ENST00000342435 CLIP1P30622 1438 aa17.27■□□□□ 0.36
PLSCR1-201ENST00000342435 CUX2O14529 1486 aa17.26■□□□□ 0.35
PLSCR1-201ENST00000342435 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
PLSCR1-201ENST00000342435 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
PLSCR1-201ENST00000342435 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
PLSCR1-201ENST00000342435 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
PLSCR1-201ENST00000342435 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
PLSCR1-201ENST00000342435 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
PLSCR1-201ENST00000342435 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
PLSCR1-201ENST00000342435 CFTRP13569 1480 aa17.19■□□□□ 0.34
PLSCR1-201ENST00000342435 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
PLSCR1-201ENST00000342435 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
PLSCR1-201ENST00000342435 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
PLSCR1-201ENST00000342435 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
PLSCR1-201ENST00000342435 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
PLSCR1-201ENST00000342435 NESP48681 1621 aa17.09■□□□□ 0.33
PLSCR1-201ENST00000342435 CUX1P39880 1505 aa17.09■□□□□ 0.33
PLSCR1-201ENST00000342435 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
PLSCR1-201ENST00000342435 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
PLSCR1-201ENST00000342435 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
PLSCR1-201ENST00000342435 NEFLP07196 543 aa17.05■□□□□ 0.32
PLSCR1-201ENST00000342435 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms