RNA–Protein interactions for RNA: ENST00000288937.6

MRPL17-201, Transcript of mitochondrial ribosomal protein L17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL17, Length 1,969 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL17-201ENST00000288937 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
MRPL17-201ENST00000288937 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
MRPL17-201ENST00000288937 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
MRPL17-201ENST00000288937 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
MRPL17-201ENST00000288937 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
MRPL17-201ENST00000288937 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
MRPL17-201ENST00000288937 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
MRPL17-201ENST00000288937 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
MRPL17-201ENST00000288937 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
MRPL17-201ENST00000288937 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
MRPL17-201ENST00000288937 ABCC9O60706 1549 aa23.58■■□□□ 1.37
MRPL17-201ENST00000288937 NACADO15069 1562 aa23.49■■□□□ 1.35
MRPL17-201ENST00000288937 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
MRPL17-201ENST00000288937 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
MRPL17-201ENST00000288937 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
MRPL17-201ENST00000288937 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
MRPL17-201ENST00000288937 WIZO95785 1651 aa22.84■■□□□ 1.25
MRPL17-201ENST00000288937 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
MRPL17-201ENST00000288937 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
MRPL17-201ENST00000288937 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
MRPL17-201ENST00000288937 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
MRPL17-201ENST00000288937 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
MRPL17-201ENST00000288937 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
MRPL17-201ENST00000288937 HRCP23327 699 aa22.55■■□□□ 1.2
MRPL17-201ENST00000288937 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
MRPL17-201ENST00000288937 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
MRPL17-201ENST00000288937 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
MRPL17-201ENST00000288937 FAM9AQ8IZU1 332 aaPredicted RBP22.44■■□□□ 1.18
MRPL17-201ENST00000288937 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
MRPL17-201ENST00000288937 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
MRPL17-201ENST00000288937 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
MRPL17-201ENST00000288937 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
MRPL17-201ENST00000288937 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
MRPL17-201ENST00000288937 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
MRPL17-201ENST00000288937 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
MRPL17-201ENST00000288937 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
MRPL17-201ENST00000288937 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
MRPL17-201ENST00000288937 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
MRPL17-201ENST00000288937 EEA1Q15075 1411 aa21.96■■□□□ 1.11
MRPL17-201ENST00000288937 SOGA1O94964 1423 aa21.94■■□□□ 1.1
MRPL17-201ENST00000288937 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
MRPL17-201ENST00000288937 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
MRPL17-201ENST00000288937 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
MRPL17-201ENST00000288937 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
MRPL17-201ENST00000288937 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
MRPL17-201ENST00000288937 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
MRPL17-201ENST00000288937 CEP162Q5TB80 1403 aa21.79■■□□□ 1.08
MRPL17-201ENST00000288937 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
MRPL17-201ENST00000288937 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
MRPL17-201ENST00000288937 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
MRPL17-201ENST00000288937 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
MRPL17-201ENST00000288937 KIF21BO75037 1637 aa21.66■■□□□ 1.06
MRPL17-201ENST00000288937 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
MRPL17-201ENST00000288937 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
MRPL17-201ENST00000288937 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
MRPL17-201ENST00000288937 CLIP1P30622 1438 aa21.44■■□□□ 1.02
MRPL17-201ENST00000288937 CFTRP13569 1480 aa21.44■■□□□ 1.02
MRPL17-201ENST00000288937 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
MRPL17-201ENST00000288937 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
MRPL17-201ENST00000288937 CUX1P39880 1505 aa21.4■■□□□ 1.02
MRPL17-201ENST00000288937 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
MRPL17-201ENST00000288937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
MRPL17-201ENST00000288937 CCER1Q8TC90 406 aaPredicted RBP21.37■■□□□ 1.01
MRPL17-201ENST00000288937 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
MRPL17-201ENST00000288937 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
MRPL17-201ENST00000288937 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
MRPL17-201ENST00000288937 PRXQ9BXM0 1461 aa21.32■■□□□ 1
MRPL17-201ENST00000288937 KIF27Q86VH2 1401 aa21.28■■□□□ 1
MRPL17-201ENST00000288937 CADPSQ9ULU8 1353 aa21.22■□□□□ 0.99
MRPL17-201ENST00000288937 APLP2Q06481 763 aa21.22■□□□□ 0.99
MRPL17-201ENST00000288937 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
MRPL17-201ENST00000288937 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
MRPL17-201ENST00000288937 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
MRPL17-201ENST00000288937 CUX2O14529 1486 aa21.08■□□□□ 0.96
MRPL17-201ENST00000288937 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
MRPL17-201ENST00000288937 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
MRPL17-201ENST00000288937 IGF1RP08069 1367 aa21.02■□□□□ 0.96
MRPL17-201ENST00000288937 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
MRPL17-201ENST00000288937 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
MRPL17-201ENST00000288937 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
MRPL17-201ENST00000288937 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
MRPL17-201ENST00000288937 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
MRPL17-201ENST00000288937 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
MRPL17-201ENST00000288937 NESP48681 1621 aa20.85■□□□□ 0.93
MRPL17-201ENST00000288937 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
MRPL17-201ENST00000288937 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
MRPL17-201ENST00000288937 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.93
MRPL17-201ENST00000288937 RRBP1Q9P2E9 1410 aaKnown RBP20.83■□□□□ 0.92
MRPL17-201ENST00000288937 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.92
MRPL17-201ENST00000288937 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
MRPL17-201ENST00000288937 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
MRPL17-201ENST00000288937 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
MRPL17-201ENST00000288937 CUL7Q14999 1698 aa20.76■□□□□ 0.91
MRPL17-201ENST00000288937 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
MRPL17-201ENST00000288937 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
MRPL17-201ENST00000288937 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
MRPL17-201ENST00000288937 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
MRPL17-201ENST00000288937 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
MRPL17-201ENST00000288937 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
MRPL17-201ENST00000288937 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms