RNA–Protein interactions for RNA: ENST00000282570.3

GMCL1-201, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMCL1, Length 4,191 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-201ENST00000282570 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
GMCL1-201ENST00000282570 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
GMCL1-201ENST00000282570 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
GMCL1-201ENST00000282570 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
GMCL1-201ENST00000282570 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
GMCL1-201ENST00000282570 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
GMCL1-201ENST00000282570 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
GMCL1-201ENST00000282570 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
GMCL1-201ENST00000282570 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
GMCL1-201ENST00000282570 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
GMCL1-201ENST00000282570 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
GMCL1-201ENST00000282570 APLP2Q06481 763 aa22.1■■□□□ 1.13
GMCL1-201ENST00000282570 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
GMCL1-201ENST00000282570 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
GMCL1-201ENST00000282570 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
GMCL1-201ENST00000282570 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
GMCL1-201ENST00000282570 ABCC9O60706 1549 aa21.84■■□□□ 1.09
GMCL1-201ENST00000282570 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
GMCL1-201ENST00000282570 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
GMCL1-201ENST00000282570 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
GMCL1-201ENST00000282570 ITGAEP38570 1179 aa21.37■■□□□ 1.01
GMCL1-201ENST00000282570 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
GMCL1-201ENST00000282570 HRCP23327 699 aa21.25■□□□□ 0.99
GMCL1-201ENST00000282570 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
GMCL1-201ENST00000282570 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
GMCL1-201ENST00000282570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
GMCL1-201ENST00000282570 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
GMCL1-201ENST00000282570 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
GMCL1-201ENST00000282570 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
GMCL1-201ENST00000282570 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
GMCL1-201ENST00000282570 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
GMCL1-201ENST00000282570 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
GMCL1-201ENST00000282570 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
GMCL1-201ENST00000282570 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
GMCL1-201ENST00000282570 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
GMCL1-201ENST00000282570 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
GMCL1-201ENST00000282570 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
GMCL1-201ENST00000282570 FBLN2P98095 1184 aa20.61■□□□□ 0.89
GMCL1-201ENST00000282570 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
GMCL1-201ENST00000282570 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
GMCL1-201ENST00000282570 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
GMCL1-201ENST00000282570 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
GMCL1-201ENST00000282570 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
GMCL1-201ENST00000282570 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
GMCL1-201ENST00000282570 NEFLP07196 543 aa20.38■□□□□ 0.85
GMCL1-201ENST00000282570 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.83
GMCL1-201ENST00000282570 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
GMCL1-201ENST00000282570 MYT1Q01538 1121 aa20.25■□□□□ 0.83
GMCL1-201ENST00000282570 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
GMCL1-201ENST00000282570 ERICH6Q7L0X2 663 aa20.14■□□□□ 0.82
GMCL1-201ENST00000282570 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
GMCL1-201ENST00000282570 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
GMCL1-201ENST00000282570 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
GMCL1-201ENST00000282570 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
GMCL1-201ENST00000282570 BCANQ96GW7 911 aa20.05■□□□□ 0.8
GMCL1-201ENST00000282570 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
GMCL1-201ENST00000282570 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
GMCL1-201ENST00000282570 HIRIP3Q9BW71 556 aaPredicted RBP19.94■□□□□ 0.78
GMCL1-201ENST00000282570 NACADO15069 1562 aa19.94■□□□□ 0.78
GMCL1-201ENST00000282570 CLIP1P30622 1438 aa19.91■□□□□ 0.78
GMCL1-201ENST00000282570 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
GMCL1-201ENST00000282570 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
GMCL1-201ENST00000282570 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
GMCL1-201ENST00000282570 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
GMCL1-201ENST00000282570 ANP32CO43423 234 aa19.84■□□□□ 0.77
GMCL1-201ENST00000282570 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
GMCL1-201ENST00000282570 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
GMCL1-201ENST00000282570 SOGA1O94964 1423 aa19.83■□□□□ 0.77
GMCL1-201ENST00000282570 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
GMCL1-201ENST00000282570 CDK11AQ9UQ88 783 aaPredicted RBP19.76■□□□□ 0.75
GMCL1-201ENST00000282570 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
GMCL1-201ENST00000282570 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
GMCL1-201ENST00000282570 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
GMCL1-201ENST00000282570 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
GMCL1-201ENST00000282570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.743e-8■□□□□ 9.5
GMCL1-201ENST00000282570 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
GMCL1-201ENST00000282570 MIER1Q8N108 512 aa19.68■□□□□ 0.74
GMCL1-201ENST00000282570 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
GMCL1-201ENST00000282570 GOLGA3Q08378 1498 aa19.66■□□□□ 0.74
GMCL1-201ENST00000282570 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
GMCL1-201ENST00000282570 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
GMCL1-201ENST00000282570 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
GMCL1-201ENST00000282570 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
GMCL1-201ENST00000282570 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
GMCL1-201ENST00000282570 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
GMCL1-201ENST00000282570 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
GMCL1-201ENST00000282570 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
GMCL1-201ENST00000282570 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
GMCL1-201ENST00000282570 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
GMCL1-201ENST00000282570 EEA1Q15075 1411 aa19.55■□□□□ 0.72
GMCL1-201ENST00000282570 WIZO95785 1651 aa19.55■□□□□ 0.72
GMCL1-201ENST00000282570 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
GMCL1-201ENST00000282570 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
GMCL1-201ENST00000282570 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
GMCL1-201ENST00000282570 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.71
GMCL1-201ENST00000282570 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
GMCL1-201ENST00000282570 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
GMCL1-201ENST00000282570 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
GMCL1-201ENST00000282570 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
GMCL1-201ENST00000282570 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms