RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 NISCHQ9Y2I1 1504 aa22.68■■□□□ 1.22
SYNRG-229ENST00000621136 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
SYNRG-229ENST00000621136 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
SYNRG-229ENST00000621136 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
SYNRG-229ENST00000621136 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
SYNRG-229ENST00000621136 HRCP23327 699 aa20.24■□□□□ 0.83
SYNRG-229ENST00000621136 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
SYNRG-229ENST00000621136 MYT1Q01538 1121 aa20.03■□□□□ 0.8
SYNRG-229ENST00000621136 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
SYNRG-229ENST00000621136 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
SYNRG-229ENST00000621136 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SYNRG-229ENST00000621136 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
SYNRG-229ENST00000621136 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
SYNRG-229ENST00000621136 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
SYNRG-229ENST00000621136 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
SYNRG-229ENST00000621136 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
SYNRG-229ENST00000621136 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
SYNRG-229ENST00000621136 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
SYNRG-229ENST00000621136 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
SYNRG-229ENST00000621136 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
SYNRG-229ENST00000621136 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
SYNRG-229ENST00000621136 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
SYNRG-229ENST00000621136 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
SYNRG-229ENST00000621136 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
SYNRG-229ENST00000621136 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.65
SYNRG-229ENST00000621136 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
SYNRG-229ENST00000621136 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
SYNRG-229ENST00000621136 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
SYNRG-229ENST00000621136 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
SYNRG-229ENST00000621136 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
SYNRG-229ENST00000621136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
SYNRG-229ENST00000621136 BCANQ96GW7 911 aa18.65■□□□□ 0.58
SYNRG-229ENST00000621136 NEFLP07196 543 aa18.56■□□□□ 0.56
SYNRG-229ENST00000621136 BCL11AQ9H165 835 aa18.51■□□□□ 0.55
SYNRG-229ENST00000621136 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
SYNRG-229ENST00000621136 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
SYNRG-229ENST00000621136 APLP2Q06481 763 aa18.29■□□□□ 0.52
SYNRG-229ENST00000621136 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
SYNRG-229ENST00000621136 ABCC9O60706 1549 aa18.23■□□□□ 0.51
SYNRG-229ENST00000621136 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
SYNRG-229ENST00000621136 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
SYNRG-229ENST00000621136 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
SYNRG-229ENST00000621136 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
SYNRG-229ENST00000621136 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
SYNRG-229ENST00000621136 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
SYNRG-229ENST00000621136 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SYNRG-229ENST00000621136 UBTFP17480 764 aaKnown RBP18.01■□□□□ 0.47
SYNRG-229ENST00000621136 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
SYNRG-229ENST00000621136 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
SYNRG-229ENST00000621136 FKBP8Q14318 412 aa17.96■□□□□ 0.47
SYNRG-229ENST00000621136 NBR1Q14596 966 aa17.96■□□□□ 0.47
SYNRG-229ENST00000621136 ITGAEP38570 1179 aa17.94■□□□□ 0.46
SYNRG-229ENST00000621136 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
SYNRG-229ENST00000621136 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
SYNRG-229ENST00000621136 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
SYNRG-229ENST00000621136 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
SYNRG-229ENST00000621136 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
SYNRG-229ENST00000621136 DAXXQ9UER7 740 aaPredicted RBP17.76■□□□□ 0.43
SYNRG-229ENST00000621136 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
SYNRG-229ENST00000621136 WIZO95785 1651 aa17.72■□□□□ 0.43
SYNRG-229ENST00000621136 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SYNRG-229ENST00000621136 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
SYNRG-229ENST00000621136 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
SYNRG-229ENST00000621136 SOGA1O94964 1423 aa17.7■□□□□ 0.42
SYNRG-229ENST00000621136 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
SYNRG-229ENST00000621136 CCDC136Q96JN2 1154 aa17.68■□□□□ 0.42
SYNRG-229ENST00000621136 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
SYNRG-229ENST00000621136 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
SYNRG-229ENST00000621136 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
SYNRG-229ENST00000621136 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
SYNRG-229ENST00000621136 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
SYNRG-229ENST00000621136 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
SYNRG-229ENST00000621136 TSHZ2Q9NRE2 1034 aa17.61■□□□□ 0.41
SYNRG-229ENST00000621136 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
SYNRG-229ENST00000621136 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
SYNRG-229ENST00000621136 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
SYNRG-229ENST00000621136 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
SYNRG-229ENST00000621136 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
SYNRG-229ENST00000621136 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
SYNRG-229ENST00000621136 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
SYNRG-229ENST00000621136 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
SYNRG-229ENST00000621136 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
SYNRG-229ENST00000621136 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
SYNRG-229ENST00000621136 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
SYNRG-229ENST00000621136 ARXQ96QS3 562 aa17.42■□□□□ 0.38
SYNRG-229ENST00000621136 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
SYNRG-229ENST00000621136 ANP32CO43423 234 aa17.41■□□□□ 0.38
SYNRG-229ENST00000621136 CLIP1P30622 1438 aa17.4■□□□□ 0.38
SYNRG-229ENST00000621136 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
SYNRG-229ENST00000621136 EEA1Q15075 1411 aa17.36■□□□□ 0.37
SYNRG-229ENST00000621136 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
SYNRG-229ENST00000621136 GLIPR1L2Q4G1C9 344 aa17.34■□□□□ 0.37
SYNRG-229ENST00000621136 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
SYNRG-229ENST00000621136 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
SYNRG-229ENST00000621136 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
SYNRG-229ENST00000621136 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
SYNRG-229ENST00000621136 NACADO15069 1562 aa17.28■□□□□ 0.36
SYNRG-229ENST00000621136 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
SYNRG-229ENST00000621136 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
SYNRG-229ENST00000621136 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms