RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
LINC00963-208ENST00000454968 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
LINC00963-208ENST00000454968 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
LINC00963-208ENST00000454968 ABCC9O60706 1549 aa32.87■■■□□ 2.85
LINC00963-208ENST00000454968 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
LINC00963-208ENST00000454968 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
LINC00963-208ENST00000454968 NACADO15069 1562 aa32.28■■■□□ 2.76
LINC00963-208ENST00000454968 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
LINC00963-208ENST00000454968 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
LINC00963-208ENST00000454968 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
LINC00963-208ENST00000454968 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
LINC00963-208ENST00000454968 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
LINC00963-208ENST00000454968 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
LINC00963-208ENST00000454968 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
LINC00963-208ENST00000454968 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
LINC00963-208ENST00000454968 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
LINC00963-208ENST00000454968 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
LINC00963-208ENST00000454968 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
LINC00963-208ENST00000454968 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
LINC00963-208ENST00000454968 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
LINC00963-208ENST00000454968 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
LINC00963-208ENST00000454968 WIZO95785 1651 aa29.95■■■□□ 2.39
LINC00963-208ENST00000454968 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.38
LINC00963-208ENST00000454968 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
LINC00963-208ENST00000454968 CC2D2AQ9P2K1 1620 aa29.86■■■□□ 2.37
LINC00963-208ENST00000454968 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
LINC00963-208ENST00000454968 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
LINC00963-208ENST00000454968 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
LINC00963-208ENST00000454968 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
LINC00963-208ENST00000454968 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
LINC00963-208ENST00000454968 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
LINC00963-208ENST00000454968 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
LINC00963-208ENST00000454968 CFTRP13569 1480 aa28.96■■■□□ 2.23
LINC00963-208ENST00000454968 CADPSQ9ULU8 1353 aa28.9■■■□□ 2.22
LINC00963-208ENST00000454968 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
LINC00963-208ENST00000454968 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
LINC00963-208ENST00000454968 NESP48681 1621 aa28.73■■■□□ 2.19
LINC00963-208ENST00000454968 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
LINC00963-208ENST00000454968 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
LINC00963-208ENST00000454968 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
LINC00963-208ENST00000454968 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
LINC00963-208ENST00000454968 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
LINC00963-208ENST00000454968 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
LINC00963-208ENST00000454968 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
LINC00963-208ENST00000454968 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
LINC00963-208ENST00000454968 SYNJ1O43426 1573 aa28.34■■■□□ 2.13
LINC00963-208ENST00000454968 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
LINC00963-208ENST00000454968 CUX1P39880 1505 aa28.32■■■□□ 2.12
LINC00963-208ENST00000454968 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
LINC00963-208ENST00000454968 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
LINC00963-208ENST00000454968 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
LINC00963-208ENST00000454968 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
LINC00963-208ENST00000454968 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
LINC00963-208ENST00000454968 THOC2Q8NI27 1593 aaKnown RBP28.21■■■□□ 2.11
LINC00963-208ENST00000454968 WDR62O43379 1518 aa28.18■■■□□ 2.1
LINC00963-208ENST00000454968 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
LINC00963-208ENST00000454968 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
LINC00963-208ENST00000454968 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
LINC00963-208ENST00000454968 CUX2O14529 1486 aa27.93■■■□□ 2.06
LINC00963-208ENST00000454968 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
LINC00963-208ENST00000454968 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
LINC00963-208ENST00000454968 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
LINC00963-208ENST00000454968 SOGA1O94964 1423 aa27.87■■■□□ 2.05
LINC00963-208ENST00000454968 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
LINC00963-208ENST00000454968 IFT140Q96RY7 1462 aa27.82■■■□□ 2.04
LINC00963-208ENST00000454968 EEA1Q15075 1411 aa27.8■■■□□ 2.04
LINC00963-208ENST00000454968 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
LINC00963-208ENST00000454968 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
LINC00963-208ENST00000454968 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
LINC00963-208ENST00000454968 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
LINC00963-208ENST00000454968 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
LINC00963-208ENST00000454968 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
LINC00963-208ENST00000454968 EIF4G3O43432 1585 aaKnown RBP27.58■■■□□ 2.01
LINC00963-208ENST00000454968 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
LINC00963-208ENST00000454968 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
LINC00963-208ENST00000454968 IGF1RP08069 1367 aa27.54■■■□□ 2
LINC00963-208ENST00000454968 PBRM1Q86U86 1689 aa27.54■■■□□ 2
LINC00963-208ENST00000454968 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 2
LINC00963-208ENST00000454968 PRXQ9BXM0 1461 aa27.5■■□□□ 1.99
LINC00963-208ENST00000454968 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
LINC00963-208ENST00000454968 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
LINC00963-208ENST00000454968 KIF21BO75037 1637 aa27.48■■□□□ 1.99
LINC00963-208ENST00000454968 CUL7Q14999 1698 aa27.47■■□□□ 1.99
LINC00963-208ENST00000454968 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
LINC00963-208ENST00000454968 MAGI1Q96QZ7 1491 aaPredicted RBP27.36■■□□□ 1.97
LINC00963-208ENST00000454968 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
LINC00963-208ENST00000454968 FHAD1B1AJZ9 1412 aa27.31■■□□□ 1.96
LINC00963-208ENST00000454968 GOLGA3Q08378 1498 aa27.31■■□□□ 1.96
LINC00963-208ENST00000454968 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
LINC00963-208ENST00000454968 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
LINC00963-208ENST00000454968 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
LINC00963-208ENST00000454968 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
LINC00963-208ENST00000454968 GRIN2AQ12879 1464 aa27.15■■□□□ 1.94
LINC00963-208ENST00000454968 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.93
LINC00963-208ENST00000454968 CHD1O14646 1710 aa27.08■■□□□ 1.93
LINC00963-208ENST00000454968 CTTNBP2Q8WZ74 1663 aa27.08■■□□□ 1.93
LINC00963-208ENST00000454968 NUP160Q12769 1436 aa27.03■■□□□ 1.92
LINC00963-208ENST00000454968 CHMP7Q8WUX9 453 aaPredicted RBP27.01■■□□□ 1.91
LINC00963-208ENST00000454968 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
LINC00963-208ENST00000454968 CEP170Q5SW79 1584 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms