RNA–Protein interactions for RNA: ENST00000372645.3

BEX3-204, Transcript of brain expressed X-linked 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEX3, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEX3-204ENST00000372645 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
BEX3-204ENST00000372645 ABCC9O60706 1549 aa43.32■■■■■ 4.52
BEX3-204ENST00000372645 CCDC180Q9P1Z9 1646 aa43.06■■■■■ 4.48
BEX3-204ENST00000372645 RB1CC1Q8TDY2 1594 aa41.1■■■■■ 4.17
BEX3-204ENST00000372645 DNAJC5BQ9UF47 199 aa40.96■■■■■ 4.15
BEX3-204ENST00000372645 NACADO15069 1562 aa40.77■■■■■ 4.12
BEX3-204ENST00000372645 DCAF8L2P0C7V8 631 aa40.47■■■■■ 4.07
BEX3-204ENST00000372645 PABPN1Q86U42 306 aaKnown RBP eCLIP40.3■■■■■ 4.04
BEX3-204ENST00000372645 UNC13AQ9UPW8 1703 aa40.24■■■■■ 4.03
BEX3-204ENST00000372645 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
BEX3-204ENST00000372645 BICRAQ9NZM4 1560 aa39.98■■■■□ 3.99
BEX3-204ENST00000372645 ZCCHC6Q5VYS8 1495 aaKnown RBP39.6■■■■□ 3.93
BEX3-204ENST00000372645 DCAF1Q9Y4B6 1507 aa39.52■■■■□ 3.92
BEX3-204ENST00000372645 SHROOM4Q9ULL8 1493 aa39.35■■■■□ 3.89
BEX3-204ENST00000372645 SCRIBQ14160 1630 aa39.2■■■■□ 3.87
BEX3-204ENST00000372645 CC2D2AQ9P2K1 1620 aa39.13■■■■□ 3.85
BEX3-204ENST00000372645 CECR2Q9BXF3 1484 aa39.05■■■■□ 3.84
BEX3-204ENST00000372645 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
BEX3-204ENST00000372645 DNAJC5Q9H3Z4 198 aa37.78■■■■□ 3.64
BEX3-204ENST00000372645 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
BEX3-204ENST00000372645 ATAD2BQ9ULI0 1458 aa37.5■■■■□ 3.59
BEX3-204ENST00000372645 CUX2O14529 1486 aa37.44■■■■□ 3.58
BEX3-204ENST00000372645 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
BEX3-204ENST00000372645 ERCC6Q03468 1493 aa37.38■■■■□ 3.57
BEX3-204ENST00000372645 SMARCA2P51531 1590 aa37.36■■■■□ 3.57
BEX3-204ENST00000372645 HMGXB3Q12766 1538 aa37.33■■■■□ 3.57
BEX3-204ENST00000372645 NESP48681 1621 aa37.16■■■■□ 3.54
BEX3-204ENST00000372645 BAZ1AQ9NRL2 1556 aaPredicted RBP37.14■■■■□ 3.54
BEX3-204ENST00000372645 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
BEX3-204ENST00000372645 PEG3Q9GZU2 1588 aa37.04■■■■□ 3.52
BEX3-204ENST00000372645 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
BEX3-204ENST00000372645 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
BEX3-204ENST00000372645 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
BEX3-204ENST00000372645 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
BEX3-204ENST00000372645 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
BEX3-204ENST00000372645 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
BEX3-204ENST00000372645 WIZO95785 1651 aa36.42■■■■□ 3.42
BEX3-204ENST00000372645 MRC2Q9UBG0 1479 aa36.32■■■■□ 3.41
BEX3-204ENST00000372645 WDR62O43379 1518 aa36.25■■■■□ 3.39
BEX3-204ENST00000372645 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
BEX3-204ENST00000372645 FANCD2Q9BXW9 1451 aa36.06■■■■□ 3.36
BEX3-204ENST00000372645 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
BEX3-204ENST00000372645 CFTRP13569 1480 aa36.02■■■■□ 3.36
BEX3-204ENST00000372645 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
BEX3-204ENST00000372645 TOP2AP11388 1531 aaKnown RBP35.92■■■■□ 3.34
BEX3-204ENST00000372645 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
BEX3-204ENST00000372645 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
BEX3-204ENST00000372645 PRDM2Q13029 1718 aa35.64■■■■□ 3.3
BEX3-204ENST00000372645 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
BEX3-204ENST00000372645 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
BEX3-204ENST00000372645 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
BEX3-204ENST00000372645 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
BEX3-204ENST00000372645 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
BEX3-204ENST00000372645 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
BEX3-204ENST00000372645 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
BEX3-204ENST00000372645 ABCC8Q09428 1581 aa35.25■■■■□ 3.23
BEX3-204ENST00000372645 DNMBPQ6XZF7 1577 aa35.2■■■■□ 3.23
BEX3-204ENST00000372645 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
BEX3-204ENST00000372645 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
BEX3-204ENST00000372645 TARBP1Q13395 1621 aaKnown RBP35.1■■■■□ 3.21
BEX3-204ENST00000372645 AQRO60306 1485 aaKnown RBP eCLIP35.05■■■■□ 3.2
BEX3-204ENST00000372645 CHD1O14646 1710 aa34.99■■■■□ 3.19
BEX3-204ENST00000372645 POLA1P09884 1462 aaPredicted RBP34.98■■■■□ 3.19
BEX3-204ENST00000372645 CYB5RLQ6IPT4 315 aa34.88■■■■□ 3.17
BEX3-204ENST00000372645 RAD54L2Q9Y4B4 1467 aa34.87■■■■□ 3.17
BEX3-204ENST00000372645 FBLN2P98095 1184 aa34.84■■■■□ 3.17
BEX3-204ENST00000372645 SOGA1O94964 1423 aa34.81■■■■□ 3.16
BEX3-204ENST00000372645 TDRD9Q8NDG6 1382 aaKnown RBP34.79■■■■□ 3.16
BEX3-204ENST00000372645 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
BEX3-204ENST00000372645 FGD5Q6ZNL6 1462 aa34.72■■■■□ 3.15
BEX3-204ENST00000372645 WDR97A6NE52 1622 aa34.67■■■■□ 3.14
BEX3-204ENST00000372645 CUX1P39880 1505 aa34.66■■■■□ 3.14
BEX3-204ENST00000372645 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
BEX3-204ENST00000372645 CLASP1Q7Z460 1538 aa34.59■■■■□ 3.13
BEX3-204ENST00000372645 MAGI1Q96QZ7 1491 aaPredicted RBP34.57■■■■□ 3.12
BEX3-204ENST00000372645 TRHP20396 242 aaPredicted RBP34.55■■■■□ 3.12
BEX3-204ENST00000372645 CHMP7Q8WUX9 453 aaPredicted RBP34.55■■■■□ 3.12
BEX3-204ENST00000372645 GRIN2BQ13224 1484 aa34.53■■■■□ 3.12
BEX3-204ENST00000372645 SYNJ1O43426 1573 aa34.5■■■■□ 3.11
BEX3-204ENST00000372645 SYNJ2O15056 1496 aa34.46■■■■□ 3.11
BEX3-204ENST00000372645 GAPVD1Q14C86 1478 aa34.39■■■■□ 3.1
BEX3-204ENST00000372645 PBRM1Q86U86 1689 aa34.38■■■■□ 3.09
BEX3-204ENST00000372645 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
BEX3-204ENST00000372645 ABCA5Q8WWZ7 1642 aa34.29■■■■□ 3.08
BEX3-204ENST00000372645 SUPT5HO00267 1087 aaKnown RBP34.18■■■■□ 3.06
BEX3-204ENST00000372645 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
BEX3-204ENST00000372645 GRIN2AQ12879 1464 aa34.09■■■■□ 3.05
BEX3-204ENST00000372645 ADAMTS12P58397 1594 aa34.04■■■■□ 3.04
BEX3-204ENST00000372645 ERCC6L2Q5T890 1561 aa34.04■■■■□ 3.04
BEX3-204ENST00000372645 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
BEX3-204ENST00000372645 TOP2BQ02880 1626 aa34.03■■■■□ 3.04
BEX3-204ENST00000372645 NUP160Q12769 1436 aa34.01■■■■□ 3.03
BEX3-204ENST00000372645 CEP170Q5SW79 1584 aa34■■■■□ 3.03
BEX3-204ENST00000372645 FHAD1B1AJZ9 1412 aa33.94■■■■□ 3.02
BEX3-204ENST00000372645 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
BEX3-204ENST00000372645 ERICH3Q5RHP9 1530 aa33.88■■■■□ 3.01
BEX3-204ENST00000372645 AEBP2Q6ZN18 517 aaPredicted RBP33.72■■■□□ 2.99
BEX3-204ENST00000372645 PRG4Q92954 1404 aaPredicted RBP33.69■■■□□ 2.98
BEX3-204ENST00000372645 JPH4Q96JJ6 628 aa33.67■■■□□ 2.98
BEX3-204ENST00000372645 KIF13AQ9H1H9 1805 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms