RNA–Protein interactions for RNA: ENST00000601870.1

AC008878.2-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AC008878.2, Length 942 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.2-201ENST00000601870 NISCHQ9Y2I1 1504 aa44.14■■■■■ 4.66
AC008878.2-201ENST00000601870 ABCC9O60706 1549 aa39.99■■■■□ 3.99
AC008878.2-201ENST00000601870 CCDC180Q9P1Z9 1646 aa39.79■■■■□ 3.96
AC008878.2-201ENST00000601870 RB1CC1Q8TDY2 1594 aa37.9■■■■□ 3.66
AC008878.2-201ENST00000601870 DNAJC5BQ9UF47 199 aa37.74■■■■□ 3.63
AC008878.2-201ENST00000601870 NACADO15069 1562 aa37.56■■■■□ 3.6
AC008878.2-201ENST00000601870 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
AC008878.2-201ENST00000601870 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
AC008878.2-201ENST00000601870 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
AC008878.2-201ENST00000601870 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
AC008878.2-201ENST00000601870 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
AC008878.2-201ENST00000601870 ZCCHC6Q5VYS8 1495 aaKnown RBP36.56■■■■□ 3.44
AC008878.2-201ENST00000601870 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
AC008878.2-201ENST00000601870 SCRIBQ14160 1630 aa36.28■■■■□ 3.4
AC008878.2-201ENST00000601870 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
AC008878.2-201ENST00000601870 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
AC008878.2-201ENST00000601870 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
AC008878.2-201ENST00000601870 EIF4G1Q04637 1599 aaKnown RBP35.98■■■■□ 3.35
AC008878.2-201ENST00000601870 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
AC008878.2-201ENST00000601870 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
AC008878.2-201ENST00000601870 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
AC008878.2-201ENST00000601870 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
AC008878.2-201ENST00000601870 CUX2O14529 1486 aa34.45■■■■□ 3.1
AC008878.2-201ENST00000601870 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
AC008878.2-201ENST00000601870 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
AC008878.2-201ENST00000601870 SMARCA2P51531 1590 aa34.42■■■■□ 3.1
AC008878.2-201ENST00000601870 NESP48681 1621 aa34.33■■■■□ 3.09
AC008878.2-201ENST00000601870 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
AC008878.2-201ENST00000601870 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.07
AC008878.2-201ENST00000601870 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
AC008878.2-201ENST00000601870 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.05
AC008878.2-201ENST00000601870 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
AC008878.2-201ENST00000601870 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
AC008878.2-201ENST00000601870 LAMC3Q9Y6N6 1575 aa33.96■■■■□ 3.03
AC008878.2-201ENST00000601870 WIZO95785 1651 aa33.73■■■□□ 2.99
AC008878.2-201ENST00000601870 PDS5BQ9NTI5 1447 aa33.66■■■□□ 2.98
AC008878.2-201ENST00000601870 CADPSQ9ULU8 1353 aa33.56■■■□□ 2.96
AC008878.2-201ENST00000601870 MRC2Q9UBG0 1479 aa33.48■■■□□ 2.95
AC008878.2-201ENST00000601870 WDR62O43379 1518 aa33.46■■■□□ 2.95
AC008878.2-201ENST00000601870 CEP164Q9UPV0 1460 aa33.29■■■□□ 2.92
AC008878.2-201ENST00000601870 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
AC008878.2-201ENST00000601870 RSF1Q96T23 1441 aaPredicted RBP33.2■■■□□ 2.91
AC008878.2-201ENST00000601870 CFTRP13569 1480 aa33.18■■■□□ 2.9
AC008878.2-201ENST00000601870 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
AC008878.2-201ENST00000601870 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
AC008878.2-201ENST00000601870 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
AC008878.2-201ENST00000601870 URB2Q14146 1524 aaKnown RBP33.06■■■□□ 2.88
AC008878.2-201ENST00000601870 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
AC008878.2-201ENST00000601870 OSCARQ8IYS5 282 aa32.75■■■□□ 2.83
AC008878.2-201ENST00000601870 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
AC008878.2-201ENST00000601870 TOPBP1Q92547 1522 aa32.63■■■□□ 2.81
AC008878.2-201ENST00000601870 RIMBP3CA6NJZ7 1639 aa32.61■■■□□ 2.81
AC008878.2-201ENST00000601870 RIMBP3BA6NNM3 1639 aa32.61■■■□□ 2.81
AC008878.2-201ENST00000601870 RIMBP3Q9UFD9 1639 aa32.61■■■□□ 2.81
AC008878.2-201ENST00000601870 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
AC008878.2-201ENST00000601870 EIF4G3O43432 1585 aaKnown RBP32.55■■■□□ 2.8
AC008878.2-201ENST00000601870 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
AC008878.2-201ENST00000601870 CHD1O14646 1710 aa32.45■■■□□ 2.78
AC008878.2-201ENST00000601870 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
AC008878.2-201ENST00000601870 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
AC008878.2-201ENST00000601870 ABCC8Q09428 1581 aa32.4■■■□□ 2.78
AC008878.2-201ENST00000601870 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.76
AC008878.2-201ENST00000601870 POLA1P09884 1462 aaPredicted RBP32.28■■■□□ 2.76
AC008878.2-201ENST00000601870 RAD54L2Q9Y4B4 1467 aa32.19■■■□□ 2.74
AC008878.2-201ENST00000601870 ARAP1Q96P48 1450 aa32.09■■■□□ 2.73
AC008878.2-201ENST00000601870 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
AC008878.2-201ENST00000601870 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
AC008878.2-201ENST00000601870 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
AC008878.2-201ENST00000601870 FBLN2P98095 1184 aa32.05■■■□□ 2.72
AC008878.2-201ENST00000601870 SOGA1O94964 1423 aa32.05■■■□□ 2.72
AC008878.2-201ENST00000601870 CUX1P39880 1505 aa32.02■■■□□ 2.72
AC008878.2-201ENST00000601870 SNAPC4Q5SXM2 1469 aa31.99■■■□□ 2.71
AC008878.2-201ENST00000601870 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
AC008878.2-201ENST00000601870 CLASP1Q7Z460 1538 aa31.94■■■□□ 2.7
AC008878.2-201ENST00000601870 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
AC008878.2-201ENST00000601870 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
AC008878.2-201ENST00000601870 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
AC008878.2-201ENST00000601870 GRIN2BQ13224 1484 aa31.8■■■□□ 2.68
AC008878.2-201ENST00000601870 TRHP20396 242 aaPredicted RBP31.76■■■□□ 2.67
AC008878.2-201ENST00000601870 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
AC008878.2-201ENST00000601870 CHMP7Q8WUX9 453 aaPredicted RBP31.73■■■□□ 2.67
AC008878.2-201ENST00000601870 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
AC008878.2-201ENST00000601870 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
AC008878.2-201ENST00000601870 ABCA10Q8WWZ4 1543 aa31.63■■■□□ 2.65
AC008878.2-201ENST00000601870 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.64
AC008878.2-201ENST00000601870 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
AC008878.2-201ENST00000601870 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
AC008878.2-201ENST00000601870 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
AC008878.2-201ENST00000601870 GRIN2AQ12879 1464 aa31.45■■■□□ 2.62
AC008878.2-201ENST00000601870 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
AC008878.2-201ENST00000601870 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
AC008878.2-201ENST00000601870 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
AC008878.2-201ENST00000601870 NUP160Q12769 1436 aa31.33■■■□□ 2.61
AC008878.2-201ENST00000601870 SHROOM2Q13796 1616 aa31.33■■■□□ 2.61
AC008878.2-201ENST00000601870 FHAD1B1AJZ9 1412 aa31.23■■■□□ 2.59
AC008878.2-201ENST00000601870 ERICH3Q5RHP9 1530 aa31.21■■■□□ 2.59
AC008878.2-201ENST00000601870 KIF13AQ9H1H9 1805 aa31.16■■■□□ 2.58
AC008878.2-201ENST00000601870 RUSC2Q8N2Y8 1516 aa31.06■■■□□ 2.56
AC008878.2-201ENST00000601870 PRG4Q92954 1404 aaPredicted RBP31.03■■■□□ 2.56
AC008878.2-201ENST00000601870 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms