RNA–Protein interactions for RNA: ENST00000565678.5

RNPS1-216, Transcript of RNA binding protein with serine rich domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNPS1, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-216ENST00000565678 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
RNPS1-216ENST00000565678 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
RNPS1-216ENST00000565678 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
RNPS1-216ENST00000565678 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
RNPS1-216ENST00000565678 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
RNPS1-216ENST00000565678 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
RNPS1-216ENST00000565678 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
RNPS1-216ENST00000565678 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
RNPS1-216ENST00000565678 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
RNPS1-216ENST00000565678 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
RNPS1-216ENST00000565678 ABCC9O60706 1549 aa25.12■■□□□ 1.61
RNPS1-216ENST00000565678 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
RNPS1-216ENST00000565678 NACADO15069 1562 aa24.87■■□□□ 1.57
RNPS1-216ENST00000565678 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
RNPS1-216ENST00000565678 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
RNPS1-216ENST00000565678 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.53
RNPS1-216ENST00000565678 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
RNPS1-216ENST00000565678 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
RNPS1-216ENST00000565678 WIZO95785 1651 aa24.36■■□□□ 1.49
RNPS1-216ENST00000565678 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
RNPS1-216ENST00000565678 HRCP23327 699 aa24.32■■□□□ 1.48
RNPS1-216ENST00000565678 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
RNPS1-216ENST00000565678 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
RNPS1-216ENST00000565678 FAM9AQ8IZU1 332 aaPredicted RBP24.13■■□□□ 1.45
RNPS1-216ENST00000565678 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
RNPS1-216ENST00000565678 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
RNPS1-216ENST00000565678 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
RNPS1-216ENST00000565678 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
RNPS1-216ENST00000565678 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
RNPS1-216ENST00000565678 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
RNPS1-216ENST00000565678 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
RNPS1-216ENST00000565678 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
RNPS1-216ENST00000565678 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
RNPS1-216ENST00000565678 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
RNPS1-216ENST00000565678 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
RNPS1-216ENST00000565678 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
RNPS1-216ENST00000565678 SOGA1O94964 1423 aa23.49■■□□□ 1.35
RNPS1-216ENST00000565678 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
RNPS1-216ENST00000565678 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
RNPS1-216ENST00000565678 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
RNPS1-216ENST00000565678 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
RNPS1-216ENST00000565678 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
RNPS1-216ENST00000565678 EEA1Q15075 1411 aa23.36■■□□□ 1.33
RNPS1-216ENST00000565678 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
RNPS1-216ENST00000565678 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
RNPS1-216ENST00000565678 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
RNPS1-216ENST00000565678 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
RNPS1-216ENST00000565678 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
RNPS1-216ENST00000565678 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
RNPS1-216ENST00000565678 TTBK1Q5TCY1 1321 aaPredicted RBP23.11■■□□□ 1.29
RNPS1-216ENST00000565678 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
RNPS1-216ENST00000565678 KIF21BO75037 1637 aa23.07■■□□□ 1.28
RNPS1-216ENST00000565678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
RNPS1-216ENST00000565678 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
RNPS1-216ENST00000565678 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
RNPS1-216ENST00000565678 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
RNPS1-216ENST00000565678 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
RNPS1-216ENST00000565678 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
RNPS1-216ENST00000565678 RAPGEF2Q9Y4G8 1499 aa22.93■■□□□ 1.26
RNPS1-216ENST00000565678 CLIP1P30622 1438 aa22.92■■□□□ 1.26
RNPS1-216ENST00000565678 CUX1P39880 1505 aa22.82■■□□□ 1.24
RNPS1-216ENST00000565678 VPS8Q8N3P4 1428 aa22.81■■□□□ 1.24
RNPS1-216ENST00000565678 CFTRP13569 1480 aa22.79■■□□□ 1.24
RNPS1-216ENST00000565678 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.23
RNPS1-216ENST00000565678 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
RNPS1-216ENST00000565678 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
RNPS1-216ENST00000565678 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
RNPS1-216ENST00000565678 APLP2Q06481 763 aa22.64■■□□□ 1.21
RNPS1-216ENST00000565678 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
RNPS1-216ENST00000565678 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
RNPS1-216ENST00000565678 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
RNPS1-216ENST00000565678 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
RNPS1-216ENST00000565678 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
RNPS1-216ENST00000565678 CUX2O14529 1486 aa22.47■■□□□ 1.19
RNPS1-216ENST00000565678 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
RNPS1-216ENST00000565678 IGF1RP08069 1367 aa22.42■■□□□ 1.18
RNPS1-216ENST00000565678 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
RNPS1-216ENST00000565678 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
RNPS1-216ENST00000565678 ARHGAP35Q9NRY4 1499 aa22.41■■□□□ 1.18
RNPS1-216ENST00000565678 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
RNPS1-216ENST00000565678 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.16
RNPS1-216ENST00000565678 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
RNPS1-216ENST00000565678 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
RNPS1-216ENST00000565678 RRBP1Q9P2E9 1410 aaKnown RBP22.25■■□□□ 1.15
RNPS1-216ENST00000565678 NESP48681 1621 aa22.23■■□□□ 1.15
RNPS1-216ENST00000565678 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
RNPS1-216ENST00000565678 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
RNPS1-216ENST00000565678 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
RNPS1-216ENST00000565678 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
RNPS1-216ENST00000565678 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
RNPS1-216ENST00000565678 CCNB3Q8WWL7 1395 aa22.16■■□□□ 1.14
RNPS1-216ENST00000565678 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
RNPS1-216ENST00000565678 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
RNPS1-216ENST00000565678 TIAM1Q13009 1591 aa22.15■■□□□ 1.14
RNPS1-216ENST00000565678 NEUROD1Q13562 356 aa22.14■■□□□ 1.14
RNPS1-216ENST00000565678 MAP3K1Q13233 1512 aa22.12■■□□□ 1.13
RNPS1-216ENST00000565678 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
RNPS1-216ENST00000565678 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
RNPS1-216ENST00000565678 ITGAEP38570 1179 aa22.06■■□□□ 1.12
RNPS1-216ENST00000565678 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms