RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
C9orf47-203ENST00000375851 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.39
C9orf47-203ENST00000375851 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
C9orf47-203ENST00000375851 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
C9orf47-203ENST00000375851 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
C9orf47-203ENST00000375851 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
C9orf47-203ENST00000375851 APLP2Q06481 763 aa21.44■■□□□ 1.02
C9orf47-203ENST00000375851 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
C9orf47-203ENST00000375851 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
C9orf47-203ENST00000375851 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
C9orf47-203ENST00000375851 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
C9orf47-203ENST00000375851 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
C9orf47-203ENST00000375851 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
C9orf47-203ENST00000375851 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
C9orf47-203ENST00000375851 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
C9orf47-203ENST00000375851 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
C9orf47-203ENST00000375851 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
C9orf47-203ENST00000375851 PPARGC1BQ86YN6 1023 aaKnown RBP20.59■□□□□ 0.89
C9orf47-203ENST00000375851 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
C9orf47-203ENST00000375851 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
C9orf47-203ENST00000375851 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
C9orf47-203ENST00000375851 ABCC9O60706 1549 aa20.33■□□□□ 0.85
C9orf47-203ENST00000375851 HRCP23327 699 aa20.2■□□□□ 0.82
C9orf47-203ENST00000375851 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
C9orf47-203ENST00000375851 ITGAEP38570 1179 aa20.17■□□□□ 0.82
C9orf47-203ENST00000375851 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
C9orf47-203ENST00000375851 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
C9orf47-203ENST00000375851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.8
C9orf47-203ENST00000375851 NEFLP07196 543 aa19.97■□□□□ 0.79
C9orf47-203ENST00000375851 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
C9orf47-203ENST00000375851 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
C9orf47-203ENST00000375851 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
C9orf47-203ENST00000375851 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
C9orf47-203ENST00000375851 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
C9orf47-203ENST00000375851 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
C9orf47-203ENST00000375851 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
C9orf47-203ENST00000375851 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
C9orf47-203ENST00000375851 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
C9orf47-203ENST00000375851 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
C9orf47-203ENST00000375851 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
C9orf47-203ENST00000375851 FBLN2P98095 1184 aa19.45■□□□□ 0.7
C9orf47-203ENST00000375851 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
C9orf47-203ENST00000375851 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.7
C9orf47-203ENST00000375851 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
C9orf47-203ENST00000375851 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
C9orf47-203ENST00000375851 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
C9orf47-203ENST00000375851 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
C9orf47-203ENST00000375851 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
C9orf47-203ENST00000375851 ANP32CO43423 234 aa19.17■□□□□ 0.66
C9orf47-203ENST00000375851 MYT1Q01538 1121 aa19.15■□□□□ 0.66
C9orf47-203ENST00000375851 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
C9orf47-203ENST00000375851 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
C9orf47-203ENST00000375851 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
C9orf47-203ENST00000375851 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
C9orf47-203ENST00000375851 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
C9orf47-203ENST00000375851 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
C9orf47-203ENST00000375851 BCANQ96GW7 911 aa19■□□□□ 0.63
C9orf47-203ENST00000375851 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
C9orf47-203ENST00000375851 NACADO15069 1562 aa18.91■□□□□ 0.62
C9orf47-203ENST00000375851 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
C9orf47-203ENST00000375851 TONSLQ96HA7 1378 aa18.88■□□□□ 0.61
C9orf47-203ENST00000375851 CLIP1P30622 1438 aa18.88■□□□□ 0.61
C9orf47-203ENST00000375851 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
C9orf47-203ENST00000375851 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
C9orf47-203ENST00000375851 EEA1Q15075 1411 aa18.81■□□□□ 0.6
C9orf47-203ENST00000375851 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
C9orf47-203ENST00000375851 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
C9orf47-203ENST00000375851 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
C9orf47-203ENST00000375851 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
C9orf47-203ENST00000375851 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
C9orf47-203ENST00000375851 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
C9orf47-203ENST00000375851 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
C9orf47-203ENST00000375851 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
C9orf47-203ENST00000375851 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
C9orf47-203ENST00000375851 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
C9orf47-203ENST00000375851 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
C9orf47-203ENST00000375851 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
C9orf47-203ENST00000375851 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
C9orf47-203ENST00000375851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
C9orf47-203ENST00000375851 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
C9orf47-203ENST00000375851 NEFMP07197 916 aa18.66■□□□□ 0.58
C9orf47-203ENST00000375851 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
C9orf47-203ENST00000375851 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
C9orf47-203ENST00000375851 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
C9orf47-203ENST00000375851 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
C9orf47-203ENST00000375851 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
C9orf47-203ENST00000375851 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
C9orf47-203ENST00000375851 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
C9orf47-203ENST00000375851 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
C9orf47-203ENST00000375851 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.56
C9orf47-203ENST00000375851 STAG3Q9UJ98 1225 aa18.58■□□□□ 0.56
C9orf47-203ENST00000375851 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
C9orf47-203ENST00000375851 FKBP8Q14318 412 aa18.57■□□□□ 0.56
C9orf47-203ENST00000375851 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
C9orf47-203ENST00000375851 HIRIP3Q9BW71 556 aaPredicted RBP18.55■□□□□ 0.56
C9orf47-203ENST00000375851 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
C9orf47-203ENST00000375851 MIER1Q8N108 512 aa18.53■□□□□ 0.56
C9orf47-203ENST00000375851 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.56
C9orf47-203ENST00000375851 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
C9orf47-203ENST00000375851 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms