RNA–Protein interactions for RNA: ENST00000620207.1

CFC1B-203, Transcript of cripto, FRL-1, cryptic family 1B, humanhuman

TSL 5 BASIC

Gene CFC1B, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1B-203ENST00000620207 NISCHQ9Y2I1 1504 aa42.8■■■■■ 4.44
CFC1B-203ENST00000620207 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.75
CFC1B-203ENST00000620207 ABCC9O60706 1549 aa38.49■■■■□ 3.75
CFC1B-203ENST00000620207 RB1CC1Q8TDY2 1594 aa36.65■■■■□ 3.46
CFC1B-203ENST00000620207 NACADO15069 1562 aa36.41■■■■□ 3.42
CFC1B-203ENST00000620207 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
CFC1B-203ENST00000620207 MYO15BQ96JP2 1530 aa35.94■■■■□ 3.34
CFC1B-203ENST00000620207 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
CFC1B-203ENST00000620207 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
CFC1B-203ENST00000620207 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
CFC1B-203ENST00000620207 BICRAQ9NZM4 1560 aa35.66■■■■□ 3.3
CFC1B-203ENST00000620207 ZCCHC6Q5VYS8 1495 aaKnown RBP35.52■■■■□ 3.28
CFC1B-203ENST00000620207 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
CFC1B-203ENST00000620207 SHROOM4Q9ULL8 1493 aa35.18■■■■□ 3.22
CFC1B-203ENST00000620207 SCRIBQ14160 1630 aa34.96■■■■□ 3.19
CFC1B-203ENST00000620207 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
CFC1B-203ENST00000620207 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
CFC1B-203ENST00000620207 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
CFC1B-203ENST00000620207 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
CFC1B-203ENST00000620207 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
CFC1B-203ENST00000620207 DNAJC5Q9H3Z4 198 aa33.42■■■□□ 2.94
CFC1B-203ENST00000620207 SMARCA4P51532 1647 aa33.41■■■□□ 2.94
CFC1B-203ENST00000620207 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
CFC1B-203ENST00000620207 SMARCA2P51531 1590 aa33.36■■■□□ 2.93
CFC1B-203ENST00000620207 CUX2O14529 1486 aa33.31■■■□□ 2.92
CFC1B-203ENST00000620207 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
CFC1B-203ENST00000620207 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
CFC1B-203ENST00000620207 PEG3Q9GZU2 1588 aa33.16■■■□□ 2.9
CFC1B-203ENST00000620207 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
CFC1B-203ENST00000620207 NESP48681 1621 aa33.07■■■□□ 2.88
CFC1B-203ENST00000620207 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
CFC1B-203ENST00000620207 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
CFC1B-203ENST00000620207 THOC2Q8NI27 1593 aaKnown RBP32.82■■■□□ 2.84
CFC1B-203ENST00000620207 KIF21AQ7Z4S6 1674 aa32.68■■■□□ 2.82
CFC1B-203ENST00000620207 PDS5BQ9NTI5 1447 aa32.63■■■□□ 2.81
CFC1B-203ENST00000620207 WIZO95785 1651 aa32.55■■■□□ 2.8
CFC1B-203ENST00000620207 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
CFC1B-203ENST00000620207 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
CFC1B-203ENST00000620207 MRC2Q9UBG0 1479 aa32.37■■■□□ 2.77
CFC1B-203ENST00000620207 WDR62O43379 1518 aa32.34■■■□□ 2.77
CFC1B-203ENST00000620207 CEP164Q9UPV0 1460 aa32.19■■■□□ 2.74
CFC1B-203ENST00000620207 CFTRP13569 1480 aa32.18■■■□□ 2.74
CFC1B-203ENST00000620207 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
CFC1B-203ENST00000620207 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
CFC1B-203ENST00000620207 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
CFC1B-203ENST00000620207 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
CFC1B-203ENST00000620207 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
CFC1B-203ENST00000620207 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
CFC1B-203ENST00000620207 TRIM41Q8WV44 630 aa31.74■■■□□ 2.67
CFC1B-203ENST00000620207 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
CFC1B-203ENST00000620207 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
CFC1B-203ENST00000620207 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
CFC1B-203ENST00000620207 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
CFC1B-203ENST00000620207 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
CFC1B-203ENST00000620207 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
CFC1B-203ENST00000620207 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
CFC1B-203ENST00000620207 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
CFC1B-203ENST00000620207 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
CFC1B-203ENST00000620207 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
CFC1B-203ENST00000620207 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
CFC1B-203ENST00000620207 ARHGEF11O15085 1522 aa31.23■■■□□ 2.59
CFC1B-203ENST00000620207 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
CFC1B-203ENST00000620207 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.59
CFC1B-203ENST00000620207 CHD1O14646 1710 aa31.18■■■□□ 2.58
CFC1B-203ENST00000620207 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
CFC1B-203ENST00000620207 SOGA1O94964 1423 aa31.05■■■□□ 2.56
CFC1B-203ENST00000620207 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
CFC1B-203ENST00000620207 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
CFC1B-203ENST00000620207 CUX1P39880 1505 aa30.98■■■□□ 2.55
CFC1B-203ENST00000620207 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
CFC1B-203ENST00000620207 CYB5RLQ6IPT4 315 aa30.92■■■□□ 2.54
CFC1B-203ENST00000620207 ARAP1Q96P48 1450 aa30.92■■■□□ 2.54
CFC1B-203ENST00000620207 FBLN2P98095 1184 aa30.9■■■□□ 2.54
CFC1B-203ENST00000620207 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.54
CFC1B-203ENST00000620207 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
CFC1B-203ENST00000620207 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
CFC1B-203ENST00000620207 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
CFC1B-203ENST00000620207 SYNJ1O43426 1573 aa30.75■■■□□ 2.51
CFC1B-203ENST00000620207 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
CFC1B-203ENST00000620207 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
CFC1B-203ENST00000620207 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
CFC1B-203ENST00000620207 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
CFC1B-203ENST00000620207 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
CFC1B-203ENST00000620207 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
CFC1B-203ENST00000620207 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
CFC1B-203ENST00000620207 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
CFC1B-203ENST00000620207 BIVM-ERCC5R4GMW8 1640 aa30.56■■■□□ 2.48
CFC1B-203ENST00000620207 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
CFC1B-203ENST00000620207 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
CFC1B-203ENST00000620207 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
CFC1B-203ENST00000620207 NUP160Q12769 1436 aa30.37■■■□□ 2.45
CFC1B-203ENST00000620207 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
CFC1B-203ENST00000620207 ERCC6L2Q5T890 1561 aa30.31■■■□□ 2.44
CFC1B-203ENST00000620207 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
CFC1B-203ENST00000620207 ERICH3Q5RHP9 1530 aa30.29■■■□□ 2.44
CFC1B-203ENST00000620207 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
CFC1B-203ENST00000620207 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
CFC1B-203ENST00000620207 PRG4Q92954 1404 aaPredicted RBP30■■■□□ 2.39
CFC1B-203ENST00000620207 RUSC2Q8N2Y8 1516 aa29.99■■■□□ 2.39
CFC1B-203ENST00000620207 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms