RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
PRKD1-202ENST00000415220 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
PRKD1-202ENST00000415220 CCDC180Q9P1Z9 1646 aa25.94■■□□□ 1.74
PRKD1-202ENST00000415220 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
PRKD1-202ENST00000415220 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
PRKD1-202ENST00000415220 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
PRKD1-202ENST00000415220 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
PRKD1-202ENST00000415220 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
PRKD1-202ENST00000415220 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
PRKD1-202ENST00000415220 SCRIBQ14160 1630 aa24.48■■□□□ 1.51
PRKD1-202ENST00000415220 ABCC9O60706 1549 aa24.43■■□□□ 1.5
PRKD1-202ENST00000415220 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
PRKD1-202ENST00000415220 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
PRKD1-202ENST00000415220 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
PRKD1-202ENST00000415220 HRCP23327 699 aa24.07■■□□□ 1.44
PRKD1-202ENST00000415220 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
PRKD1-202ENST00000415220 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
PRKD1-202ENST00000415220 NACADO15069 1562 aa23.97■■□□□ 1.43
PRKD1-202ENST00000415220 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
PRKD1-202ENST00000415220 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
PRKD1-202ENST00000415220 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
PRKD1-202ENST00000415220 WIZO95785 1651 aa23.76■■□□□ 1.39
PRKD1-202ENST00000415220 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
PRKD1-202ENST00000415220 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
PRKD1-202ENST00000415220 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.36
PRKD1-202ENST00000415220 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
PRKD1-202ENST00000415220 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
PRKD1-202ENST00000415220 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
PRKD1-202ENST00000415220 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
PRKD1-202ENST00000415220 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
PRKD1-202ENST00000415220 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
PRKD1-202ENST00000415220 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
PRKD1-202ENST00000415220 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
PRKD1-202ENST00000415220 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
PRKD1-202ENST00000415220 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
PRKD1-202ENST00000415220 SOGA1O94964 1423 aa23■■□□□ 1.27
PRKD1-202ENST00000415220 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
PRKD1-202ENST00000415220 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
PRKD1-202ENST00000415220 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
PRKD1-202ENST00000415220 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
PRKD1-202ENST00000415220 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
PRKD1-202ENST00000415220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
PRKD1-202ENST00000415220 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
PRKD1-202ENST00000415220 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
PRKD1-202ENST00000415220 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
PRKD1-202ENST00000415220 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
PRKD1-202ENST00000415220 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
PRKD1-202ENST00000415220 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
PRKD1-202ENST00000415220 EEA1Q15075 1411 aa22.65■■□□□ 1.22
PRKD1-202ENST00000415220 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
PRKD1-202ENST00000415220 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
PRKD1-202ENST00000415220 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
PRKD1-202ENST00000415220 KIF21BO75037 1637 aa22.45■■□□□ 1.18
PRKD1-202ENST00000415220 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
PRKD1-202ENST00000415220 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
PRKD1-202ENST00000415220 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
PRKD1-202ENST00000415220 CLIP1P30622 1438 aa22.37■■□□□ 1.17
PRKD1-202ENST00000415220 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
PRKD1-202ENST00000415220 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
PRKD1-202ENST00000415220 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.15
PRKD1-202ENST00000415220 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
PRKD1-202ENST00000415220 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
PRKD1-202ENST00000415220 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
PRKD1-202ENST00000415220 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
PRKD1-202ENST00000415220 CUX1P39880 1505 aa22.19■■□□□ 1.14
PRKD1-202ENST00000415220 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
PRKD1-202ENST00000415220 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
PRKD1-202ENST00000415220 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
PRKD1-202ENST00000415220 APLP2Q06481 763 aa22.07■■□□□ 1.12
PRKD1-202ENST00000415220 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
PRKD1-202ENST00000415220 CFTRP13569 1480 aa22.06■■□□□ 1.12
PRKD1-202ENST00000415220 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
PRKD1-202ENST00000415220 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
PRKD1-202ENST00000415220 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
PRKD1-202ENST00000415220 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
PRKD1-202ENST00000415220 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
PRKD1-202ENST00000415220 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
PRKD1-202ENST00000415220 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
PRKD1-202ENST00000415220 CUX2O14529 1486 aa21.84■■□□□ 1.09
PRKD1-202ENST00000415220 IGF1RP08069 1367 aa21.81■■□□□ 1.08
PRKD1-202ENST00000415220 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
PRKD1-202ENST00000415220 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
PRKD1-202ENST00000415220 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
PRKD1-202ENST00000415220 MIER1Q8N108 512 aa21.77■■□□□ 1.07
PRKD1-202ENST00000415220 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PRKD1-202ENST00000415220 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
PRKD1-202ENST00000415220 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
PRKD1-202ENST00000415220 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
PRKD1-202ENST00000415220 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
PRKD1-202ENST00000415220 ITGAEP38570 1179 aa21.69■■□□□ 1.06
PRKD1-202ENST00000415220 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
PRKD1-202ENST00000415220 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
PRKD1-202ENST00000415220 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
PRKD1-202ENST00000415220 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
PRKD1-202ENST00000415220 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
PRKD1-202ENST00000415220 NESP48681 1621 aa21.61■■□□□ 1.05
PRKD1-202ENST00000415220 TIAM1Q13009 1591 aa21.6■■□□□ 1.05
PRKD1-202ENST00000415220 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
PRKD1-202ENST00000415220 PHLDB1Q86UU1 1377 aa21.52■■□□□ 1.04
PRKD1-202ENST00000415220 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms