RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
PCDHGA3-203ENST00000619750 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.69
PCDHGA3-203ENST00000619750 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
PCDHGA3-203ENST00000619750 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
PCDHGA3-203ENST00000619750 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
PCDHGA3-203ENST00000619750 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
PCDHGA3-203ENST00000619750 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
PCDHGA3-203ENST00000619750 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
PCDHGA3-203ENST00000619750 ABCC9O60706 1549 aa24.18■■□□□ 1.46
PCDHGA3-203ENST00000619750 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
PCDHGA3-203ENST00000619750 NACADO15069 1562 aa23.85■■□□□ 1.41
PCDHGA3-203ENST00000619750 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.4
PCDHGA3-203ENST00000619750 HRCP23327 699 aa23.71■■□□□ 1.39
PCDHGA3-203ENST00000619750 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
PCDHGA3-203ENST00000619750 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.38
PCDHGA3-203ENST00000619750 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
PCDHGA3-203ENST00000619750 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
PCDHGA3-203ENST00000619750 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
PCDHGA3-203ENST00000619750 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
PCDHGA3-203ENST00000619750 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
PCDHGA3-203ENST00000619750 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
PCDHGA3-203ENST00000619750 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
PCDHGA3-203ENST00000619750 TRIM26Q12899 539 aaPredicted RBP23.03■■□□□ 1.28
PCDHGA3-203ENST00000619750 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PCDHGA3-203ENST00000619750 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
PCDHGA3-203ENST00000619750 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
PCDHGA3-203ENST00000619750 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
PCDHGA3-203ENST00000619750 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
PCDHGA3-203ENST00000619750 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
PCDHGA3-203ENST00000619750 WIZO95785 1651 aa22.58■■□□□ 1.2
PCDHGA3-203ENST00000619750 TTBK1Q5TCY1 1321 aaPredicted RBP22.52■■□□□ 1.2
PCDHGA3-203ENST00000619750 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
PCDHGA3-203ENST00000619750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
PCDHGA3-203ENST00000619750 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
PCDHGA3-203ENST00000619750 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
PCDHGA3-203ENST00000619750 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
PCDHGA3-203ENST00000619750 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
PCDHGA3-203ENST00000619750 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
PCDHGA3-203ENST00000619750 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
PCDHGA3-203ENST00000619750 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
PCDHGA3-203ENST00000619750 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
PCDHGA3-203ENST00000619750 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
PCDHGA3-203ENST00000619750 SOGA1O94964 1423 aa22.08■■□□□ 1.13
PCDHGA3-203ENST00000619750 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
PCDHGA3-203ENST00000619750 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
PCDHGA3-203ENST00000619750 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
PCDHGA3-203ENST00000619750 HMGXB3Q12766 1538 aa22■■□□□ 1.11
PCDHGA3-203ENST00000619750 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
PCDHGA3-203ENST00000619750 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
PCDHGA3-203ENST00000619750 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
PCDHGA3-203ENST00000619750 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
PCDHGA3-203ENST00000619750 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
PCDHGA3-203ENST00000619750 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
PCDHGA3-203ENST00000619750 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
PCDHGA3-203ENST00000619750 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
PCDHGA3-203ENST00000619750 HNRNPUL2Q1KMD3 747 aaKnown RBP21.76■■□□□ 1.07
PCDHGA3-203ENST00000619750 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
PCDHGA3-203ENST00000619750 ACIN1Q9UKV3 1341 aaKnown RBP21.72■■□□□ 1.07
PCDHGA3-203ENST00000619750 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
PCDHGA3-203ENST00000619750 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
PCDHGA3-203ENST00000619750 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
PCDHGA3-203ENST00000619750 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
PCDHGA3-203ENST00000619750 EEA1Q15075 1411 aa21.59■■□□□ 1.05
PCDHGA3-203ENST00000619750 CLIP1P30622 1438 aa21.52■■□□□ 1.04
PCDHGA3-203ENST00000619750 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
PCDHGA3-203ENST00000619750 CFTRP13569 1480 aa21.51■■□□□ 1.03
PCDHGA3-203ENST00000619750 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
PCDHGA3-203ENST00000619750 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
PCDHGA3-203ENST00000619750 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
PCDHGA3-203ENST00000619750 APLP2Q06481 763 aa21.47■■□□□ 1.03
PCDHGA3-203ENST00000619750 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
PCDHGA3-203ENST00000619750 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
PCDHGA3-203ENST00000619750 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
PCDHGA3-203ENST00000619750 MIER1Q8N108 512 aa21.41■■□□□ 1.02
PCDHGA3-203ENST00000619750 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
PCDHGA3-203ENST00000619750 KIF21BO75037 1637 aa21.35■■□□□ 1.01
PCDHGA3-203ENST00000619750 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
PCDHGA3-203ENST00000619750 TOP2BQ02880 1626 aa21.28■■□□□ 1
PCDHGA3-203ENST00000619750 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
PCDHGA3-203ENST00000619750 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
PCDHGA3-203ENST00000619750 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
PCDHGA3-203ENST00000619750 NESP48681 1621 aa21.24■□□□□ 0.99
PCDHGA3-203ENST00000619750 ITGAEP38570 1179 aa21.22■□□□□ 0.99
PCDHGA3-203ENST00000619750 CUX1P39880 1505 aa21.21■□□□□ 0.99
PCDHGA3-203ENST00000619750 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
PCDHGA3-203ENST00000619750 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
PCDHGA3-203ENST00000619750 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
PCDHGA3-203ENST00000619750 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
PCDHGA3-203ENST00000619750 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
PCDHGA3-203ENST00000619750 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
PCDHGA3-203ENST00000619750 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
PCDHGA3-203ENST00000619750 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
PCDHGA3-203ENST00000619750 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
PCDHGA3-203ENST00000619750 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
PCDHGA3-203ENST00000619750 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
PCDHGA3-203ENST00000619750 ERICH3Q5RHP9 1530 aa20.94■□□□□ 0.94
PCDHGA3-203ENST00000619750 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
PCDHGA3-203ENST00000619750 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
PCDHGA3-203ENST00000619750 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
PCDHGA3-203ENST00000619750 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms