RNA–Protein interactions for RNA: ENST00000621673.4

CFC1-203, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

TSL 2 BASIC

Gene CFC1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-203ENST00000621673 NISCHQ9Y2I1 1504 aa44.05■■■■■ 4.64
CFC1-203ENST00000621673 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
CFC1-203ENST00000621673 ABCC9O60706 1549 aa39.21■■■■□ 3.87
CFC1-203ENST00000621673 RB1CC1Q8TDY2 1594 aa37.53■■■■□ 3.6
CFC1-203ENST00000621673 NACADO15069 1562 aa37.35■■■■□ 3.57
CFC1-203ENST00000621673 MYO15BQ96JP2 1530 aa36.97■■■■□ 3.51
CFC1-203ENST00000621673 DCAF8L2P0C7V8 631 aa36.94■■■■□ 3.5
CFC1-203ENST00000621673 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
CFC1-203ENST00000621673 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
CFC1-203ENST00000621673 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
CFC1-203ENST00000621673 DCAF1Q9Y4B6 1507 aa36.51■■■■□ 3.44
CFC1-203ENST00000621673 PABPN1Q86U42 306 aaKnown RBP eCLIP36.49■■■■□ 3.43
CFC1-203ENST00000621673 BICRAQ9NZM4 1560 aa36.37■■■■□ 3.41
CFC1-203ENST00000621673 SHROOM4Q9ULL8 1493 aa36.09■■■■□ 3.37
CFC1-203ENST00000621673 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
CFC1-203ENST00000621673 CC2D2AQ9P2K1 1620 aa35.49■■■■□ 3.27
CFC1-203ENST00000621673 EIF4G1Q04637 1599 aaKnown RBP35.48■■■■□ 3.27
CFC1-203ENST00000621673 CECR2Q9BXF3 1484 aa35.38■■■■□ 3.25
CFC1-203ENST00000621673 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
CFC1-203ENST00000621673 ATAD2BQ9ULI0 1458 aa34.32■■■■□ 3.09
CFC1-203ENST00000621673 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
CFC1-203ENST00000621673 SMARCA2P51531 1590 aa34.28■■■■□ 3.08
CFC1-203ENST00000621673 HMGXB3Q12766 1538 aa34.22■■■■□ 3.07
CFC1-203ENST00000621673 BAZ1AQ9NRL2 1556 aaPredicted RBP34.21■■■■□ 3.07
CFC1-203ENST00000621673 PEG3Q9GZU2 1588 aa34.07■■■■□ 3.04
CFC1-203ENST00000621673 BAZ1BQ9UIG0 1483 aaKnown RBP33.98■■■■□ 3.03
CFC1-203ENST00000621673 CUX2O14529 1486 aa33.9■■■■□ 3.02
CFC1-203ENST00000621673 ERCC6Q03468 1493 aa33.89■■■■□ 3.02
CFC1-203ENST00000621673 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
CFC1-203ENST00000621673 NESP48681 1621 aa33.71■■■□□ 2.99
CFC1-203ENST00000621673 DNAJC5Q9H3Z4 198 aa33.67■■■□□ 2.98
CFC1-203ENST00000621673 LAMC3Q9Y6N6 1575 aa33.67■■■□□ 2.98
CFC1-203ENST00000621673 PDS5BQ9NTI5 1447 aa33.46■■■□□ 2.95
CFC1-203ENST00000621673 WIZO95785 1651 aa33.45■■■□□ 2.94
CFC1-203ENST00000621673 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
CFC1-203ENST00000621673 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
CFC1-203ENST00000621673 KIF21AQ7Z4S6 1674 aa33.32■■■□□ 2.92
CFC1-203ENST00000621673 RSF1Q96T23 1441 aaPredicted RBP33.26■■■□□ 2.92
CFC1-203ENST00000621673 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
CFC1-203ENST00000621673 MRC2Q9UBG0 1479 aa33.11■■■□□ 2.89
CFC1-203ENST00000621673 CFTRP13569 1480 aa33.06■■■□□ 2.88
CFC1-203ENST00000621673 WDR62O43379 1518 aa33.04■■■□□ 2.88
CFC1-203ENST00000621673 CEP164Q9UPV0 1460 aa33.01■■■□□ 2.87
CFC1-203ENST00000621673 FANCD2Q9BXW9 1451 aa32.96■■■□□ 2.87
CFC1-203ENST00000621673 PRDM2Q13029 1718 aa32.72■■■□□ 2.83
CFC1-203ENST00000621673 CCDC88BA6NC98 1476 aa32.7■■■□□ 2.83
CFC1-203ENST00000621673 URB2Q14146 1524 aaKnown RBP32.66■■■□□ 2.82
CFC1-203ENST00000621673 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
CFC1-203ENST00000621673 IFT140Q96RY7 1462 aa32.38■■■□□ 2.77
CFC1-203ENST00000621673 TOPBP1Q92547 1522 aa32.35■■■□□ 2.77
CFC1-203ENST00000621673 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
CFC1-203ENST00000621673 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
CFC1-203ENST00000621673 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
CFC1-203ENST00000621673 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
CFC1-203ENST00000621673 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
CFC1-203ENST00000621673 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
CFC1-203ENST00000621673 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
CFC1-203ENST00000621673 AQRO60306 1485 aaKnown RBP eCLIP31.93■■■□□ 2.7
CFC1-203ENST00000621673 SOGA1O94964 1423 aa31.9■■■□□ 2.7
CFC1-203ENST00000621673 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
CFC1-203ENST00000621673 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
CFC1-203ENST00000621673 FGD5Q6ZNL6 1462 aa31.83■■■□□ 2.69
CFC1-203ENST00000621673 RIMBP3CA6NJZ7 1639 aa31.83■■■□□ 2.69
CFC1-203ENST00000621673 RIMBP3BA6NNM3 1639 aa31.83■■■□□ 2.69
CFC1-203ENST00000621673 RIMBP3Q9UFD9 1639 aa31.83■■■□□ 2.69
CFC1-203ENST00000621673 CUX1P39880 1505 aa31.82■■■□□ 2.68
CFC1-203ENST00000621673 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
CFC1-203ENST00000621673 CHD1O14646 1710 aa31.78■■■□□ 2.68
CFC1-203ENST00000621673 ARHGEF11O15085 1522 aa31.76■■■□□ 2.68
CFC1-203ENST00000621673 TDRD9Q8NDG6 1382 aaKnown RBP31.75■■■□□ 2.67
CFC1-203ENST00000621673 FBLN2P98095 1184 aa31.66■■■□□ 2.66
CFC1-203ENST00000621673 MAGI1Q96QZ7 1491 aaPredicted RBP31.65■■■□□ 2.66
CFC1-203ENST00000621673 GRIN2BQ13224 1484 aa31.64■■■□□ 2.66
CFC1-203ENST00000621673 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
CFC1-203ENST00000621673 ABCA10Q8WWZ4 1543 aa31.55■■■□□ 2.64
CFC1-203ENST00000621673 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
CFC1-203ENST00000621673 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
CFC1-203ENST00000621673 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
CFC1-203ENST00000621673 SYNJ1O43426 1573 aa31.5■■■□□ 2.63
CFC1-203ENST00000621673 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
CFC1-203ENST00000621673 CYB5RLQ6IPT4 315 aa31.48■■■□□ 2.63
CFC1-203ENST00000621673 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
CFC1-203ENST00000621673 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
CFC1-203ENST00000621673 ARAP1Q96P48 1450 aa31.45■■■□□ 2.62
CFC1-203ENST00000621673 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
CFC1-203ENST00000621673 TOP2BQ02880 1626 aa31.41■■■□□ 2.62
CFC1-203ENST00000621673 BIVM-ERCC5R4GMW8 1640 aa31.41■■■□□ 2.62
CFC1-203ENST00000621673 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
CFC1-203ENST00000621673 ADAMTS12P58397 1594 aa31.19■■■□□ 2.58
CFC1-203ENST00000621673 ERICH3Q5RHP9 1530 aa31.18■■■□□ 2.58
CFC1-203ENST00000621673 FHAD1B1AJZ9 1412 aa31.16■■■□□ 2.58
CFC1-203ENST00000621673 NUP160Q12769 1436 aa31.13■■■□□ 2.57
CFC1-203ENST00000621673 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
CFC1-203ENST00000621673 CEP170Q5SW79 1584 aa31.04■■■□□ 2.56
CFC1-203ENST00000621673 SHROOM2Q13796 1616 aa30.97■■■□□ 2.55
CFC1-203ENST00000621673 ERCC6L2Q5T890 1561 aa30.89■■■□□ 2.54
CFC1-203ENST00000621673 KIF27Q86VH2 1401 aa30.81■■■□□ 2.52
CFC1-203ENST00000621673 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
CFC1-203ENST00000621673 IGF1RP08069 1367 aa30.76■■■□□ 2.52
CFC1-203ENST00000621673 PRG4Q92954 1404 aaPredicted RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms