RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
POLR2E-213ENST00000615234 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
POLR2E-213ENST00000615234 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
POLR2E-213ENST00000615234 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
POLR2E-213ENST00000615234 SUPT5HO00267 1087 aaKnown RBP25.76■■□□□ 1.71
POLR2E-213ENST00000615234 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
POLR2E-213ENST00000615234 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
POLR2E-213ENST00000615234 ABCC9O60706 1549 aa25.34■■□□□ 1.65
POLR2E-213ENST00000615234 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
POLR2E-213ENST00000615234 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
POLR2E-213ENST00000615234 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
POLR2E-213ENST00000615234 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
POLR2E-213ENST00000615234 NACADO15069 1562 aa24.37■■□□□ 1.49
POLR2E-213ENST00000615234 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
POLR2E-213ENST00000615234 HRCP23327 699 aa24.28■■□□□ 1.48
POLR2E-213ENST00000615234 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
POLR2E-213ENST00000615234 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
POLR2E-213ENST00000615234 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.45
POLR2E-213ENST00000615234 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
POLR2E-213ENST00000615234 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
POLR2E-213ENST00000615234 WIZO95785 1651 aa23.94■■□□□ 1.42
POLR2E-213ENST00000615234 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
POLR2E-213ENST00000615234 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
POLR2E-213ENST00000615234 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
POLR2E-213ENST00000615234 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
POLR2E-213ENST00000615234 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
POLR2E-213ENST00000615234 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
POLR2E-213ENST00000615234 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
POLR2E-213ENST00000615234 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
POLR2E-213ENST00000615234 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
POLR2E-213ENST00000615234 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
POLR2E-213ENST00000615234 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
POLR2E-213ENST00000615234 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
POLR2E-213ENST00000615234 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
POLR2E-213ENST00000615234 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
POLR2E-213ENST00000615234 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
POLR2E-213ENST00000615234 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
POLR2E-213ENST00000615234 SOGA1O94964 1423 aa23.15■■□□□ 1.3
POLR2E-213ENST00000615234 EEA1Q15075 1411 aa23.06■■□□□ 1.28
POLR2E-213ENST00000615234 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
POLR2E-213ENST00000615234 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
POLR2E-213ENST00000615234 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
POLR2E-213ENST00000615234 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.28
POLR2E-213ENST00000615234 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
POLR2E-213ENST00000615234 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
POLR2E-213ENST00000615234 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
POLR2E-213ENST00000615234 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
POLR2E-213ENST00000615234 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
POLR2E-213ENST00000615234 GOLGA3Q08378 1498 aa22.89■■□□□ 1.25
POLR2E-213ENST00000615234 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
POLR2E-213ENST00000615234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
POLR2E-213ENST00000615234 CCER1Q8TC90 406 aaPredicted RBP22.79■■□□□ 1.24
POLR2E-213ENST00000615234 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
POLR2E-213ENST00000615234 KIF21BO75037 1637 aa22.76■■□□□ 1.23
POLR2E-213ENST00000615234 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
POLR2E-213ENST00000615234 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
POLR2E-213ENST00000615234 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
POLR2E-213ENST00000615234 CLIP1P30622 1438 aa22.61■■□□□ 1.21
POLR2E-213ENST00000615234 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
POLR2E-213ENST00000615234 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
POLR2E-213ENST00000615234 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
POLR2E-213ENST00000615234 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
POLR2E-213ENST00000615234 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
POLR2E-213ENST00000615234 CUX1P39880 1505 aa22.41■■□□□ 1.18
POLR2E-213ENST00000615234 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
POLR2E-213ENST00000615234 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
POLR2E-213ENST00000615234 CFTRP13569 1480 aa22.37■■□□□ 1.17
POLR2E-213ENST00000615234 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
POLR2E-213ENST00000615234 APLP2Q06481 763 aa22.35■■□□□ 1.17
POLR2E-213ENST00000615234 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
POLR2E-213ENST00000615234 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
POLR2E-213ENST00000615234 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.16
POLR2E-213ENST00000615234 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
POLR2E-213ENST00000615234 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
POLR2E-213ENST00000615234 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
POLR2E-213ENST00000615234 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
POLR2E-213ENST00000615234 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
POLR2E-213ENST00000615234 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
POLR2E-213ENST00000615234 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
POLR2E-213ENST00000615234 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
POLR2E-213ENST00000615234 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
POLR2E-213ENST00000615234 NESP48681 1621 aa22.08■■□□□ 1.13
POLR2E-213ENST00000615234 CUX2O14529 1486 aa22.06■■□□□ 1.12
POLR2E-213ENST00000615234 IGF1RP08069 1367 aa22.05■■□□□ 1.12
POLR2E-213ENST00000615234 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
POLR2E-213ENST00000615234 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
POLR2E-213ENST00000615234 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
POLR2E-213ENST00000615234 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
POLR2E-213ENST00000615234 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
POLR2E-213ENST00000615234 CARMIL1Q5VZK9 1371 aa21.94■■□□□ 1.1
POLR2E-213ENST00000615234 CCNB3Q8WWL7 1395 aa21.9■■□□□ 1.1
POLR2E-213ENST00000615234 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
POLR2E-213ENST00000615234 MIER1Q8N108 512 aa21.87■■□□□ 1.09
POLR2E-213ENST00000615234 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
POLR2E-213ENST00000615234 MAP3K1Q13233 1512 aa21.85■■□□□ 1.09
POLR2E-213ENST00000615234 TIAM1Q13009 1591 aa21.85■■□□□ 1.09
POLR2E-213ENST00000615234 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
POLR2E-213ENST00000615234 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
POLR2E-213ENST00000615234 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
POLR2E-213ENST00000615234 LRRC9Q6ZRR7 1453 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms