RNA–Protein interactions for RNA: ENST00000381106.4

FAM239B-201, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 1,099 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-201ENST00000381106 NISCHQ9Y2I1 1504 aa44.25■■■■■ 4.67
FAM239B-201ENST00000381106 CCDC180Q9P1Z9 1646 aa39.48■■■■□ 3.91
FAM239B-201ENST00000381106 ABCC9O60706 1549 aa38.98■■■■□ 3.83
FAM239B-201ENST00000381106 RB1CC1Q8TDY2 1594 aa37.35■■■■□ 3.57
FAM239B-201ENST00000381106 NACADO15069 1562 aa37.24■■■■□ 3.55
FAM239B-201ENST00000381106 DCAF8L2P0C7V8 631 aa37.16■■■■□ 3.54
FAM239B-201ENST00000381106 MYO15BQ96JP2 1530 aa36.97■■■■□ 3.51
FAM239B-201ENST00000381106 ZCCHC6Q5VYS8 1495 aaKnown RBP36.81■■■■□ 3.48
FAM239B-201ENST00000381106 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
FAM239B-201ENST00000381106 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.42
FAM239B-201ENST00000381106 UNC13AQ9UPW8 1703 aa36.42■■■■□ 3.42
FAM239B-201ENST00000381106 DNAJC5BQ9UF47 199 aa36.34■■■■□ 3.41
FAM239B-201ENST00000381106 BICRAQ9NZM4 1560 aa36.26■■■■□ 3.39
FAM239B-201ENST00000381106 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
FAM239B-201ENST00000381106 SHROOM4Q9ULL8 1493 aa35.92■■■■□ 3.34
FAM239B-201ENST00000381106 EIF4G1Q04637 1599 aaKnown RBP35.32■■■■□ 3.24
FAM239B-201ENST00000381106 CC2D2AQ9P2K1 1620 aa35.24■■■■□ 3.23
FAM239B-201ENST00000381106 CECR2Q9BXF3 1484 aa35.1■■■■□ 3.21
FAM239B-201ENST00000381106 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
FAM239B-201ENST00000381106 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
FAM239B-201ENST00000381106 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
FAM239B-201ENST00000381106 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.08
FAM239B-201ENST00000381106 SMARCA2P51531 1590 aa34.26■■■■□ 3.07
FAM239B-201ENST00000381106 HMGXB3Q12766 1538 aa34.18■■■■□ 3.06
FAM239B-201ENST00000381106 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
FAM239B-201ENST00000381106 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
FAM239B-201ENST00000381106 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.03
FAM239B-201ENST00000381106 WIZO95785 1651 aa33.64■■■□□ 2.98
FAM239B-201ENST00000381106 NESP48681 1621 aa33.63■■■□□ 2.97
FAM239B-201ENST00000381106 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
FAM239B-201ENST00000381106 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
FAM239B-201ENST00000381106 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.96
FAM239B-201ENST00000381106 CUX2O14529 1486 aa33.47■■■□□ 2.95
FAM239B-201ENST00000381106 CADPSQ9ULU8 1353 aa33.36■■■□□ 2.93
FAM239B-201ENST00000381106 PDS5BQ9NTI5 1447 aa33.32■■■□□ 2.92
FAM239B-201ENST00000381106 TOP2AP11388 1531 aaKnown RBP33.32■■■□□ 2.92
FAM239B-201ENST00000381106 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
FAM239B-201ENST00000381106 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
FAM239B-201ENST00000381106 DNAJC5Q9H3Z4 198 aa33.15■■■□□ 2.9
FAM239B-201ENST00000381106 CFTRP13569 1480 aa33.1■■■□□ 2.89
FAM239B-201ENST00000381106 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
FAM239B-201ENST00000381106 FANCD2Q9BXW9 1451 aa32.95■■■□□ 2.87
FAM239B-201ENST00000381106 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
FAM239B-201ENST00000381106 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
FAM239B-201ENST00000381106 WDR62O43379 1518 aa32.9■■■□□ 2.86
FAM239B-201ENST00000381106 PRDM2Q13029 1718 aa32.8■■■□□ 2.84
FAM239B-201ENST00000381106 URB2Q14146 1524 aaKnown RBP32.66■■■□□ 2.82
FAM239B-201ENST00000381106 SUPT5HO00267 1087 aaKnown RBP32.41■■■□□ 2.78
FAM239B-201ENST00000381106 TOPBP1Q92547 1522 aa32.38■■■□□ 2.77
FAM239B-201ENST00000381106 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
FAM239B-201ENST00000381106 DNMBPQ6XZF7 1577 aa32.31■■■□□ 2.76
FAM239B-201ENST00000381106 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
FAM239B-201ENST00000381106 ZNF608Q9ULD9 1512 aaPredicted RBP32.16■■■□□ 2.74
FAM239B-201ENST00000381106 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
FAM239B-201ENST00000381106 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
FAM239B-201ENST00000381106 TARBP1Q13395 1621 aaKnown RBP32.06■■■□□ 2.72
FAM239B-201ENST00000381106 CUX1P39880 1505 aa32■■■□□ 2.71
FAM239B-201ENST00000381106 EIF4G3O43432 1585 aaKnown RBP31.99■■■□□ 2.71
FAM239B-201ENST00000381106 SOGA1O94964 1423 aa31.94■■■□□ 2.7
FAM239B-201ENST00000381106 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
FAM239B-201ENST00000381106 RAD54L2Q9Y4B4 1467 aa31.93■■■□□ 2.7
FAM239B-201ENST00000381106 AQRO60306 1485 aaKnown RBP eCLIP31.92■■■□□ 2.7
FAM239B-201ENST00000381106 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
FAM239B-201ENST00000381106 WDR97A6NE52 1622 aa31.81■■■□□ 2.68
FAM239B-201ENST00000381106 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
FAM239B-201ENST00000381106 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.66
FAM239B-201ENST00000381106 FBLN2P98095 1184 aa31.69■■■□□ 2.66
FAM239B-201ENST00000381106 TOP2BQ02880 1626 aa31.67■■■□□ 2.66
FAM239B-201ENST00000381106 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
FAM239B-201ENST00000381106 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
FAM239B-201ENST00000381106 GRIN2BQ13224 1484 aa31.63■■■□□ 2.65
FAM239B-201ENST00000381106 SNAPC4Q5SXM2 1469 aa31.62■■■□□ 2.65
FAM239B-201ENST00000381106 CHD1O14646 1710 aa31.61■■■□□ 2.65
FAM239B-201ENST00000381106 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
FAM239B-201ENST00000381106 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
FAM239B-201ENST00000381106 GAPVD1Q14C86 1478 aa31.57■■■□□ 2.64
FAM239B-201ENST00000381106 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
FAM239B-201ENST00000381106 CHMP7Q8WUX9 453 aaPredicted RBP31.5■■■□□ 2.63
FAM239B-201ENST00000381106 RIMBP3CA6NJZ7 1639 aa31.49■■■□□ 2.63
FAM239B-201ENST00000381106 RIMBP3BA6NNM3 1639 aa31.49■■■□□ 2.63
FAM239B-201ENST00000381106 RIMBP3Q9UFD9 1639 aa31.49■■■□□ 2.63
FAM239B-201ENST00000381106 ARHGEF11O15085 1522 aa31.48■■■□□ 2.63
FAM239B-201ENST00000381106 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
FAM239B-201ENST00000381106 PBRM1Q86U86 1689 aa31.45■■■□□ 2.63
FAM239B-201ENST00000381106 CLASP1Q7Z460 1538 aa31.35■■■□□ 2.61
FAM239B-201ENST00000381106 CYB5RLQ6IPT4 315 aa31.34■■■□□ 2.61
FAM239B-201ENST00000381106 ERICH3Q5RHP9 1530 aa31.25■■■□□ 2.59
FAM239B-201ENST00000381106 ADAMTS12P58397 1594 aa31.25■■■□□ 2.59
FAM239B-201ENST00000381106 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
FAM239B-201ENST00000381106 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
FAM239B-201ENST00000381106 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
FAM239B-201ENST00000381106 NUP160Q12769 1436 aa31.13■■■□□ 2.57
FAM239B-201ENST00000381106 CEP170Q5SW79 1584 aa31.06■■■□□ 2.56
FAM239B-201ENST00000381106 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
FAM239B-201ENST00000381106 IGF1RP08069 1367 aa30.97■■■□□ 2.55
FAM239B-201ENST00000381106 CUL7Q14999 1698 aa30.91■■■□□ 2.54
FAM239B-201ENST00000381106 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
FAM239B-201ENST00000381106 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
FAM239B-201ENST00000381106 ERCC6L2Q5T890 1561 aa30.85■■■□□ 2.53
FAM239B-201ENST00000381106 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms