RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.63
LINC00960-201ENST00000463183 CCDC180Q9P1Z9 1646 aa39.12■■■■□ 3.85
LINC00960-201ENST00000463183 ABCC9O60706 1549 aa38.79■■■■□ 3.8
LINC00960-201ENST00000463183 DCAF8L2P0C7V8 631 aa37.13■■■■□ 3.54
LINC00960-201ENST00000463183 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
LINC00960-201ENST00000463183 NACADO15069 1562 aa36.88■■■■□ 3.49
LINC00960-201ENST00000463183 ZCCHC6Q5VYS8 1495 aaKnown RBP36.53■■■■□ 3.44
LINC00960-201ENST00000463183 MYO15BQ96JP2 1530 aa36.45■■■■□ 3.43
LINC00960-201ENST00000463183 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
LINC00960-201ENST00000463183 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
LINC00960-201ENST00000463183 UNC13AQ9UPW8 1703 aa36.17■■■■□ 3.38
LINC00960-201ENST00000463183 BICRAQ9NZM4 1560 aa35.91■■■■□ 3.34
LINC00960-201ENST00000463183 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
LINC00960-201ENST00000463183 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
LINC00960-201ENST00000463183 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
LINC00960-201ENST00000463183 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
LINC00960-201ENST00000463183 CC2D2AQ9P2K1 1620 aa34.98■■■■□ 3.19
LINC00960-201ENST00000463183 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
LINC00960-201ENST00000463183 SMARCA4P51532 1647 aa34.17■■■■□ 3.06
LINC00960-201ENST00000463183 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
LINC00960-201ENST00000463183 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.04
LINC00960-201ENST00000463183 NCAPD3P42695 1498 aa34.04■■■■□ 3.04
LINC00960-201ENST00000463183 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
LINC00960-201ENST00000463183 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
LINC00960-201ENST00000463183 HMGXB3Q12766 1538 aa33.83■■■■□ 3.01
LINC00960-201ENST00000463183 BAZ1BQ9UIG0 1483 aaKnown RBP33.82■■■■□ 3
LINC00960-201ENST00000463183 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
LINC00960-201ENST00000463183 WIZO95785 1651 aa33.55■■■□□ 2.96
LINC00960-201ENST00000463183 ERCC6Q03468 1493 aa33.45■■■□□ 2.95
LINC00960-201ENST00000463183 NESP48681 1621 aa33.45■■■□□ 2.95
LINC00960-201ENST00000463183 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
LINC00960-201ENST00000463183 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
LINC00960-201ENST00000463183 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
LINC00960-201ENST00000463183 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
LINC00960-201ENST00000463183 CUX2O14529 1486 aa33.06■■■□□ 2.88
LINC00960-201ENST00000463183 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
LINC00960-201ENST00000463183 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
LINC00960-201ENST00000463183 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
LINC00960-201ENST00000463183 CFTRP13569 1480 aa32.8■■■□□ 2.84
LINC00960-201ENST00000463183 CCDC88BA6NC98 1476 aa32.77■■■□□ 2.84
LINC00960-201ENST00000463183 FANCD2Q9BXW9 1451 aa32.75■■■□□ 2.83
LINC00960-201ENST00000463183 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
LINC00960-201ENST00000463183 CEP164Q9UPV0 1460 aa32.73■■■□□ 2.83
LINC00960-201ENST00000463183 WDR62O43379 1518 aa32.58■■■□□ 2.81
LINC00960-201ENST00000463183 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
LINC00960-201ENST00000463183 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
LINC00960-201ENST00000463183 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.78
LINC00960-201ENST00000463183 URB2Q14146 1524 aaKnown RBP32.42■■■□□ 2.78
LINC00960-201ENST00000463183 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
LINC00960-201ENST00000463183 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
LINC00960-201ENST00000463183 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
LINC00960-201ENST00000463183 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
LINC00960-201ENST00000463183 ZNF608Q9ULD9 1512 aaPredicted RBP31.97■■■□□ 2.71
LINC00960-201ENST00000463183 POLA1P09884 1462 aaPredicted RBP31.89■■■□□ 2.7
LINC00960-201ENST00000463183 CUX1P39880 1505 aa31.83■■■□□ 2.69
LINC00960-201ENST00000463183 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.68
LINC00960-201ENST00000463183 EIF4G3O43432 1585 aaKnown RBP31.8■■■□□ 2.68
LINC00960-201ENST00000463183 TARBP1Q13395 1621 aaKnown RBP31.79■■■□□ 2.68
LINC00960-201ENST00000463183 FGD5Q6ZNL6 1462 aa31.79■■■□□ 2.68
LINC00960-201ENST00000463183 SOGA1O94964 1423 aa31.78■■■□□ 2.68
LINC00960-201ENST00000463183 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.68
LINC00960-201ENST00000463183 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
LINC00960-201ENST00000463183 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
LINC00960-201ENST00000463183 FBLN2P98095 1184 aa31.58■■■□□ 2.65
LINC00960-201ENST00000463183 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
LINC00960-201ENST00000463183 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
LINC00960-201ENST00000463183 SYNJ1O43426 1573 aa31.47■■■□□ 2.63
LINC00960-201ENST00000463183 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
LINC00960-201ENST00000463183 CHD1O14646 1710 aa31.45■■■□□ 2.63
LINC00960-201ENST00000463183 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
LINC00960-201ENST00000463183 TOP2BQ02880 1626 aa31.43■■■□□ 2.62
LINC00960-201ENST00000463183 GRIN2BQ13224 1484 aa31.41■■■□□ 2.62
LINC00960-201ENST00000463183 BIVM-ERCC5R4GMW8 1640 aa31.41■■■□□ 2.62
LINC00960-201ENST00000463183 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
LINC00960-201ENST00000463183 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
LINC00960-201ENST00000463183 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
LINC00960-201ENST00000463183 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
LINC00960-201ENST00000463183 PBRM1Q86U86 1689 aa31.31■■■□□ 2.6
LINC00960-201ENST00000463183 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
LINC00960-201ENST00000463183 RIMBP3CA6NJZ7 1639 aa31.23■■■□□ 2.59
LINC00960-201ENST00000463183 RIMBP3BA6NNM3 1639 aa31.23■■■□□ 2.59
LINC00960-201ENST00000463183 RIMBP3Q9UFD9 1639 aa31.23■■■□□ 2.59
LINC00960-201ENST00000463183 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
LINC00960-201ENST00000463183 ARHGEF11O15085 1522 aa31.2■■■□□ 2.59
LINC00960-201ENST00000463183 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
LINC00960-201ENST00000463183 CLASP1Q7Z460 1538 aa31.05■■■□□ 2.56
LINC00960-201ENST00000463183 CYB5RLQ6IPT4 315 aa31.03■■■□□ 2.56
LINC00960-201ENST00000463183 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
LINC00960-201ENST00000463183 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
LINC00960-201ENST00000463183 FHAD1B1AJZ9 1412 aa30.99■■■□□ 2.55
LINC00960-201ENST00000463183 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
LINC00960-201ENST00000463183 KIF27Q86VH2 1401 aa30.89■■■□□ 2.54
LINC00960-201ENST00000463183 CEP170Q5SW79 1584 aa30.87■■■□□ 2.53
LINC00960-201ENST00000463183 NUP160Q12769 1436 aa30.84■■■□□ 2.53
LINC00960-201ENST00000463183 IGF1RP08069 1367 aa30.78■■■□□ 2.52
LINC00960-201ENST00000463183 ERCC6L2Q5T890 1561 aa30.7■■■□□ 2.51
LINC00960-201ENST00000463183 CUL7Q14999 1698 aa30.68■■■□□ 2.5
LINC00960-201ENST00000463183 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
LINC00960-201ENST00000463183 SHROOM2Q13796 1616 aa30.6■■■□□ 2.49
LINC00960-201ENST00000463183 JPH4Q96JJ6 628 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms