RNA–Protein interactions for RNA: ENST00000499247.2

TOB1-202, Transcript of transducer of ERBB2, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOB1, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB1-202ENST00000499247 NISCHQ9Y2I1 1504 aa34.39■■■■□ 3.1
TOB1-202ENST00000499247 CCDC180Q9P1Z9 1646 aa29.76■■■□□ 2.35
TOB1-202ENST00000499247 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
TOB1-202ENST00000499247 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
TOB1-202ENST00000499247 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
TOB1-202ENST00000499247 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
TOB1-202ENST00000499247 ABCC9O60706 1549 aa28.12■■■□□ 2.09
TOB1-202ENST00000499247 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
TOB1-202ENST00000499247 NACADO15069 1562 aa27.74■■■□□ 2.03
TOB1-202ENST00000499247 SCRIBQ14160 1630 aa27.52■■■□□ 2
TOB1-202ENST00000499247 SUPT5HO00267 1087 aaKnown RBP27.51■■□□□ 1.99
TOB1-202ENST00000499247 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
TOB1-202ENST00000499247 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
TOB1-202ENST00000499247 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
TOB1-202ENST00000499247 CECR2Q9BXF3 1484 aa26.75■■□□□ 1.87
TOB1-202ENST00000499247 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
TOB1-202ENST00000499247 MROH2BQ7Z745 1585 aa26.59■■□□□ 1.85
TOB1-202ENST00000499247 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
TOB1-202ENST00000499247 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
TOB1-202ENST00000499247 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
TOB1-202ENST00000499247 WIZO95785 1651 aa26.37■■□□□ 1.81
TOB1-202ENST00000499247 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
TOB1-202ENST00000499247 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
TOB1-202ENST00000499247 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
TOB1-202ENST00000499247 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
TOB1-202ENST00000499247 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
TOB1-202ENST00000499247 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
TOB1-202ENST00000499247 TRIM41Q8WV44 630 aa25.83■■□□□ 1.72
TOB1-202ENST00000499247 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
TOB1-202ENST00000499247 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
TOB1-202ENST00000499247 NCAPD3P42695 1498 aa25.64■■□□□ 1.7
TOB1-202ENST00000499247 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
TOB1-202ENST00000499247 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
TOB1-202ENST00000499247 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
TOB1-202ENST00000499247 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
TOB1-202ENST00000499247 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
TOB1-202ENST00000499247 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
TOB1-202ENST00000499247 CFTRP13569 1480 aa25.15■■□□□ 1.62
TOB1-202ENST00000499247 EHMT2Q96KQ7 1210 aa25.08■■□□□ 1.6
TOB1-202ENST00000499247 CADPSQ9ULU8 1353 aa25.06■■□□□ 1.6
TOB1-202ENST00000499247 SYNJ1O43426 1573 aa25.06■■□□□ 1.6
TOB1-202ENST00000499247 SOGA1O94964 1423 aa25.04■■□□□ 1.6
TOB1-202ENST00000499247 EEA1Q15075 1411 aa25■■□□□ 1.59
TOB1-202ENST00000499247 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
TOB1-202ENST00000499247 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
TOB1-202ENST00000499247 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
TOB1-202ENST00000499247 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
TOB1-202ENST00000499247 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
TOB1-202ENST00000499247 CUX1P39880 1505 aa24.84■■□□□ 1.57
TOB1-202ENST00000499247 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
TOB1-202ENST00000499247 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
TOB1-202ENST00000499247 NESP48681 1621 aa24.74■■□□□ 1.55
TOB1-202ENST00000499247 UBTFP17480 764 aaKnown RBP24.72■■□□□ 1.55
TOB1-202ENST00000499247 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
TOB1-202ENST00000499247 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
TOB1-202ENST00000499247 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
TOB1-202ENST00000499247 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
TOB1-202ENST00000499247 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
TOB1-202ENST00000499247 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
TOB1-202ENST00000499247 KIF21BO75037 1637 aa24.58■■□□□ 1.53
TOB1-202ENST00000499247 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
TOB1-202ENST00000499247 CEP162Q5TB80 1403 aa24.56■■□□□ 1.52
TOB1-202ENST00000499247 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
TOB1-202ENST00000499247 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
TOB1-202ENST00000499247 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
TOB1-202ENST00000499247 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
TOB1-202ENST00000499247 CUX2O14529 1486 aa24.48■■□□□ 1.51
TOB1-202ENST00000499247 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
TOB1-202ENST00000499247 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
TOB1-202ENST00000499247 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
TOB1-202ENST00000499247 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
TOB1-202ENST00000499247 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
TOB1-202ENST00000499247 IGF1RP08069 1367 aa24.38■■□□□ 1.49
TOB1-202ENST00000499247 RAD54L2Q9Y4B4 1467 aa24.36■■□□□ 1.49
TOB1-202ENST00000499247 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
TOB1-202ENST00000499247 CLIP1P30622 1438 aa24.33■■□□□ 1.49
TOB1-202ENST00000499247 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
TOB1-202ENST00000499247 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
TOB1-202ENST00000499247 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
TOB1-202ENST00000499247 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
TOB1-202ENST00000499247 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
TOB1-202ENST00000499247 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
TOB1-202ENST00000499247 VPS8Q8N3P4 1428 aa24.12■■□□□ 1.45
TOB1-202ENST00000499247 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
TOB1-202ENST00000499247 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
TOB1-202ENST00000499247 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
TOB1-202ENST00000499247 APLP2Q06481 763 aa24.06■■□□□ 1.44
TOB1-202ENST00000499247 CUL7Q14999 1698 aa24.05■■□□□ 1.44
TOB1-202ENST00000499247 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
TOB1-202ENST00000499247 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
TOB1-202ENST00000499247 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
TOB1-202ENST00000499247 WDR62O43379 1518 aa24.02■■□□□ 1.44
TOB1-202ENST00000499247 HRCP23327 699 aa23.98■■□□□ 1.43
TOB1-202ENST00000499247 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
TOB1-202ENST00000499247 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
TOB1-202ENST00000499247 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.43
TOB1-202ENST00000499247 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.425e-6■■□□□ 13.9
TOB1-202ENST00000499247 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
TOB1-202ENST00000499247 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
TOB1-202ENST00000499247 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms