RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
R3HDM2-204ENST00000402412 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
R3HDM2-204ENST00000402412 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.34
R3HDM2-204ENST00000402412 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
R3HDM2-204ENST00000402412 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
R3HDM2-204ENST00000402412 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
R3HDM2-204ENST00000402412 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
R3HDM2-204ENST00000402412 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
R3HDM2-204ENST00000402412 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
R3HDM2-204ENST00000402412 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
R3HDM2-204ENST00000402412 ABCC9O60706 1549 aa21.9■■□□□ 1.1
R3HDM2-204ENST00000402412 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
R3HDM2-204ENST00000402412 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
R3HDM2-204ENST00000402412 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
R3HDM2-204ENST00000402412 APLP2Q06481 763 aa21.4■■□□□ 1.02
R3HDM2-204ENST00000402412 NACADO15069 1562 aa21.4■■□□□ 1.02
R3HDM2-204ENST00000402412 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
R3HDM2-204ENST00000402412 RB1CC1Q8TDY2 1594 aa21.26■□□□□ 0.99
R3HDM2-204ENST00000402412 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
R3HDM2-204ENST00000402412 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
R3HDM2-204ENST00000402412 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
R3HDM2-204ENST00000402412 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
R3HDM2-204ENST00000402412 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.97
R3HDM2-204ENST00000402412 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
R3HDM2-204ENST00000402412 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
R3HDM2-204ENST00000402412 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
R3HDM2-204ENST00000402412 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
R3HDM2-204ENST00000402412 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
R3HDM2-204ENST00000402412 ITGAEP38570 1179 aa20.74■□□□□ 0.91
R3HDM2-204ENST00000402412 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
R3HDM2-204ENST00000402412 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
R3HDM2-204ENST00000402412 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
R3HDM2-204ENST00000402412 HRCP23327 699 aa20.59■□□□□ 0.89
R3HDM2-204ENST00000402412 ZEB1P37275 1124 aaPredicted RBP20.58■□□□□ 0.88
R3HDM2-204ENST00000402412 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
R3HDM2-204ENST00000402412 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
R3HDM2-204ENST00000402412 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
R3HDM2-204ENST00000402412 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
R3HDM2-204ENST00000402412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
R3HDM2-204ENST00000402412 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
R3HDM2-204ENST00000402412 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
R3HDM2-204ENST00000402412 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
R3HDM2-204ENST00000402412 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
R3HDM2-204ENST00000402412 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
R3HDM2-204ENST00000402412 NEFLP07196 543 aa20.28■□□□□ 0.84
R3HDM2-204ENST00000402412 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
R3HDM2-204ENST00000402412 WIZO95785 1651 aa20.22■□□□□ 0.83
R3HDM2-204ENST00000402412 MYT1Q01538 1121 aa20.11■□□□□ 0.81
R3HDM2-204ENST00000402412 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
R3HDM2-204ENST00000402412 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
R3HDM2-204ENST00000402412 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
R3HDM2-204ENST00000402412 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
R3HDM2-204ENST00000402412 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.79
R3HDM2-204ENST00000402412 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
R3HDM2-204ENST00000402412 BCANQ96GW7 911 aa19.98■□□□□ 0.79
R3HDM2-204ENST00000402412 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
R3HDM2-204ENST00000402412 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
R3HDM2-204ENST00000402412 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
R3HDM2-204ENST00000402412 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
R3HDM2-204ENST00000402412 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.77
R3HDM2-204ENST00000402412 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
R3HDM2-204ENST00000402412 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
R3HDM2-204ENST00000402412 ARID3CA6NKF2 412 aa19.77■□□□□ 0.76
R3HDM2-204ENST00000402412 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
R3HDM2-204ENST00000402412 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
R3HDM2-204ENST00000402412 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
R3HDM2-204ENST00000402412 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
R3HDM2-204ENST00000402412 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
R3HDM2-204ENST00000402412 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
R3HDM2-204ENST00000402412 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
R3HDM2-204ENST00000402412 DAXXQ9UER7 740 aaPredicted RBP19.59■□□□□ 0.73
R3HDM2-204ENST00000402412 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
R3HDM2-204ENST00000402412 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
R3HDM2-204ENST00000402412 FBLN2P98095 1184 aa19.5■□□□□ 0.71
R3HDM2-204ENST00000402412 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
R3HDM2-204ENST00000402412 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
R3HDM2-204ENST00000402412 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
R3HDM2-204ENST00000402412 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
R3HDM2-204ENST00000402412 CFTRP13569 1480 aa19.36■□□□□ 0.69
R3HDM2-204ENST00000402412 EEA1Q15075 1411 aa19.35■□□□□ 0.69
R3HDM2-204ENST00000402412 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
R3HDM2-204ENST00000402412 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
R3HDM2-204ENST00000402412 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
R3HDM2-204ENST00000402412 SOGA1O94964 1423 aa19.28■□□□□ 0.68
R3HDM2-204ENST00000402412 ANP32CO43423 234 aa19.28■□□□□ 0.68
R3HDM2-204ENST00000402412 SALL2Q9Y467 1007 aaPredicted RBP19.26■□□□□ 0.67
R3HDM2-204ENST00000402412 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
R3HDM2-204ENST00000402412 RTL5Q5HYW3 569 aaPredicted RBP19.24■□□□□ 0.67
R3HDM2-204ENST00000402412 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
R3HDM2-204ENST00000402412 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
R3HDM2-204ENST00000402412 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
R3HDM2-204ENST00000402412 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
R3HDM2-204ENST00000402412 FKBP8Q14318 412 aa19.14■□□□□ 0.65
R3HDM2-204ENST00000402412 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
R3HDM2-204ENST00000402412 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
R3HDM2-204ENST00000402412 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
R3HDM2-204ENST00000402412 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
R3HDM2-204ENST00000402412 NESP48681 1621 aa19.12■□□□□ 0.65
R3HDM2-204ENST00000402412 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
R3HDM2-204ENST00000402412 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms