RNA–Protein interactions for RNA: ENST00000330115.3

TMEM44-201, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best) BASIC

Gene TMEM44, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-201ENST00000330115 NISCHQ9Y2I1 1504 aa39.66■■■■□ 3.94
TMEM44-201ENST00000330115 CCDC180Q9P1Z9 1646 aa35.6■■■■□ 3.29
TMEM44-201ENST00000330115 ABCC9O60706 1549 aa35.57■■■■□ 3.28
TMEM44-201ENST00000330115 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
TMEM44-201ENST00000330115 NACADO15069 1562 aa33.58■■■□□ 2.97
TMEM44-201ENST00000330115 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
TMEM44-201ENST00000330115 DNAJC5BQ9UF47 199 aa33.34■■■□□ 2.93
TMEM44-201ENST00000330115 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
TMEM44-201ENST00000330115 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
TMEM44-201ENST00000330115 PABPN1Q86U42 306 aaKnown RBP eCLIP33.07■■■□□ 2.88
TMEM44-201ENST00000330115 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.86
TMEM44-201ENST00000330115 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
TMEM44-201ENST00000330115 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
TMEM44-201ENST00000330115 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
TMEM44-201ENST00000330115 SHROOM4Q9ULL8 1493 aa32.34■■■□□ 2.77
TMEM44-201ENST00000330115 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
TMEM44-201ENST00000330115 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
TMEM44-201ENST00000330115 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
TMEM44-201ENST00000330115 NCAPD3P42695 1498 aa31■■■□□ 2.55
TMEM44-201ENST00000330115 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
TMEM44-201ENST00000330115 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
TMEM44-201ENST00000330115 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
TMEM44-201ENST00000330115 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
TMEM44-201ENST00000330115 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
TMEM44-201ENST00000330115 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
TMEM44-201ENST00000330115 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
TMEM44-201ENST00000330115 ERCC6Q03468 1493 aa30.62■■■□□ 2.49
TMEM44-201ENST00000330115 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
TMEM44-201ENST00000330115 NESP48681 1621 aa30.61■■■□□ 2.49
TMEM44-201ENST00000330115 CUX2O14529 1486 aa30.55■■■□□ 2.48
TMEM44-201ENST00000330115 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
TMEM44-201ENST00000330115 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.44
TMEM44-201ENST00000330115 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
TMEM44-201ENST00000330115 WIZO95785 1651 aa30.28■■■□□ 2.44
TMEM44-201ENST00000330115 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
TMEM44-201ENST00000330115 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
TMEM44-201ENST00000330115 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
TMEM44-201ENST00000330115 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
TMEM44-201ENST00000330115 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
TMEM44-201ENST00000330115 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
TMEM44-201ENST00000330115 WDR62O43379 1518 aa29.85■■■□□ 2.37
TMEM44-201ENST00000330115 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
TMEM44-201ENST00000330115 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
TMEM44-201ENST00000330115 CFTRP13569 1480 aa29.74■■■□□ 2.35
TMEM44-201ENST00000330115 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
TMEM44-201ENST00000330115 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
TMEM44-201ENST00000330115 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
TMEM44-201ENST00000330115 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
TMEM44-201ENST00000330115 TOPBP1Q92547 1522 aa29.21■■■□□ 2.27
TMEM44-201ENST00000330115 ZNF608Q9ULD9 1512 aaPredicted RBP29.19■■■□□ 2.26
TMEM44-201ENST00000330115 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
TMEM44-201ENST00000330115 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
TMEM44-201ENST00000330115 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
TMEM44-201ENST00000330115 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
TMEM44-201ENST00000330115 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
TMEM44-201ENST00000330115 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
TMEM44-201ENST00000330115 TARBP1Q13395 1621 aaKnown RBP28.99■■■□□ 2.23
TMEM44-201ENST00000330115 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
TMEM44-201ENST00000330115 RIMBP3CA6NJZ7 1639 aa28.89■■■□□ 2.22
TMEM44-201ENST00000330115 RIMBP3BA6NNM3 1639 aa28.89■■■□□ 2.22
TMEM44-201ENST00000330115 RIMBP3Q9UFD9 1639 aa28.89■■■□□ 2.22
TMEM44-201ENST00000330115 AQRO60306 1485 aaKnown RBP eCLIP28.88■■■□□ 2.21
TMEM44-201ENST00000330115 CHD1O14646 1710 aa28.85■■■□□ 2.21
TMEM44-201ENST00000330115 RAD54L2Q9Y4B4 1467 aa28.84■■■□□ 2.21
TMEM44-201ENST00000330115 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
TMEM44-201ENST00000330115 CUX1P39880 1505 aa28.76■■■□□ 2.19
TMEM44-201ENST00000330115 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
TMEM44-201ENST00000330115 SOGA1O94964 1423 aa28.71■■■□□ 2.19
TMEM44-201ENST00000330115 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
TMEM44-201ENST00000330115 WDR97A6NE52 1622 aa28.63■■■□□ 2.17
TMEM44-201ENST00000330115 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
TMEM44-201ENST00000330115 FBLN2P98095 1184 aa28.58■■■□□ 2.17
TMEM44-201ENST00000330115 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.165e-6■■■■■ 29.2
TMEM44-201ENST00000330115 ARAP1Q96P48 1450 aa28.52■■■□□ 2.16
TMEM44-201ENST00000330115 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
TMEM44-201ENST00000330115 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
TMEM44-201ENST00000330115 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
TMEM44-201ENST00000330115 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
TMEM44-201ENST00000330115 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
TMEM44-201ENST00000330115 CYB5RLQ6IPT4 315 aa28.45■■■□□ 2.14
TMEM44-201ENST00000330115 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
TMEM44-201ENST00000330115 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
TMEM44-201ENST00000330115 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
TMEM44-201ENST00000330115 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
TMEM44-201ENST00000330115 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
TMEM44-201ENST00000330115 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
TMEM44-201ENST00000330115 GAPVD1Q14C86 1478 aa28.39■■■□□ 2.13
TMEM44-201ENST00000330115 CHMP7Q8WUX9 453 aaPredicted RBP28.35■■■□□ 2.13
TMEM44-201ENST00000330115 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
TMEM44-201ENST00000330115 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
TMEM44-201ENST00000330115 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
TMEM44-201ENST00000330115 ERCC6L2Q5T890 1561 aa28.11■■■□□ 2.09
TMEM44-201ENST00000330115 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
TMEM44-201ENST00000330115 NUP160Q12769 1436 aa28.05■■■□□ 2.08
TMEM44-201ENST00000330115 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
TMEM44-201ENST00000330115 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.07
TMEM44-201ENST00000330115 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
TMEM44-201ENST00000330115 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
TMEM44-201ENST00000330115 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
TMEM44-201ENST00000330115 EEA1Q15075 1411 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms