Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WASH4P-201ENST00000564273 1246 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AC133539.2-201ENST00000604757 467 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AC005252.3-201ENST00000623855 2258 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AC007686.3-201ENST00000619017 3487 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 SOCS2P1-201ENST00000417727 557 ntBASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 TERF1P3-201ENST00000505638 1227 ntBASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 PRSS30P-206ENST00000641773 873 ntBASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 AC005089.1-201ENST00000619486 2241 ntBASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC162PA2VCL2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC162PA2VCL2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCDC162PA2VCL2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CCDC162PA2VCL2 SNX18-202ENST00000343017 3140 ntBASIC15.21■□□□□ 0.02
CCDC162PA2VCL2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AL137783.1-201ENST00000623494 1896 ntBASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 NUS1P3-201ENST00000423502 862 ntBASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.2■□□□□ 0.02
CCDC162PA2VCL2 AC140912.1-201ENST00000577171 1054 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms