RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
RPH3AL-201ENST00000323434 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
RPH3AL-201ENST00000323434 CCDC180Q9P1Z9 1646 aa27.03■■□□□ 1.92
RPH3AL-201ENST00000323434 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
RPH3AL-201ENST00000323434 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
RPH3AL-201ENST00000323434 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
RPH3AL-201ENST00000323434 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
RPH3AL-201ENST00000323434 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
RPH3AL-201ENST00000323434 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
RPH3AL-201ENST00000323434 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
RPH3AL-201ENST00000323434 ABCC9O60706 1549 aa25.38■■□□□ 1.65
RPH3AL-201ENST00000323434 HRCP23327 699 aa25.27■■□□□ 1.64
RPH3AL-201ENST00000323434 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
RPH3AL-201ENST00000323434 NACADO15069 1562 aa25.09■■□□□ 1.61
RPH3AL-201ENST00000323434 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
RPH3AL-201ENST00000323434 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
RPH3AL-201ENST00000323434 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
RPH3AL-201ENST00000323434 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
RPH3AL-201ENST00000323434 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
RPH3AL-201ENST00000323434 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
RPH3AL-201ENST00000323434 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
RPH3AL-201ENST00000323434 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
RPH3AL-201ENST00000323434 WIZO95785 1651 aa24.61■■□□□ 1.53
RPH3AL-201ENST00000323434 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
RPH3AL-201ENST00000323434 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
RPH3AL-201ENST00000323434 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
RPH3AL-201ENST00000323434 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
RPH3AL-201ENST00000323434 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
RPH3AL-201ENST00000323434 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
RPH3AL-201ENST00000323434 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
RPH3AL-201ENST00000323434 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.45
RPH3AL-201ENST00000323434 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
RPH3AL-201ENST00000323434 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
RPH3AL-201ENST00000323434 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
RPH3AL-201ENST00000323434 ABCC8Q09428 1581 aa24.04■■□□□ 1.44
RPH3AL-201ENST00000323434 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
RPH3AL-201ENST00000323434 SOGA1O94964 1423 aa23.8■■□□□ 1.4
RPH3AL-201ENST00000323434 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
RPH3AL-201ENST00000323434 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
RPH3AL-201ENST00000323434 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
RPH3AL-201ENST00000323434 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
RPH3AL-201ENST00000323434 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
RPH3AL-201ENST00000323434 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
RPH3AL-201ENST00000323434 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
RPH3AL-201ENST00000323434 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
RPH3AL-201ENST00000323434 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
RPH3AL-201ENST00000323434 EEA1Q15075 1411 aa23.57■■□□□ 1.36
RPH3AL-201ENST00000323434 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
RPH3AL-201ENST00000323434 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
RPH3AL-201ENST00000323434 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
RPH3AL-201ENST00000323434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
RPH3AL-201ENST00000323434 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
RPH3AL-201ENST00000323434 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
RPH3AL-201ENST00000323434 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
RPH3AL-201ENST00000323434 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
RPH3AL-201ENST00000323434 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
RPH3AL-201ENST00000323434 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
RPH3AL-201ENST00000323434 KIF21BO75037 1637 aa23.22■■□□□ 1.31
RPH3AL-201ENST00000323434 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
RPH3AL-201ENST00000323434 CLIP1P30622 1438 aa23.2■■□□□ 1.31
RPH3AL-201ENST00000323434 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
RPH3AL-201ENST00000323434 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
RPH3AL-201ENST00000323434 ACIN1Q9UKV3 1341 aaKnown RBP23.17■■□□□ 1.3
RPH3AL-201ENST00000323434 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
RPH3AL-201ENST00000323434 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
RPH3AL-201ENST00000323434 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
RPH3AL-201ENST00000323434 APLP2Q06481 763 aa23.07■■□□□ 1.28
RPH3AL-201ENST00000323434 CUX1P39880 1505 aa23.05■■□□□ 1.28
RPH3AL-201ENST00000323434 VPS8Q8N3P4 1428 aa23.05■■□□□ 1.28
RPH3AL-201ENST00000323434 CFTRP13569 1480 aa23.03■■□□□ 1.28
RPH3AL-201ENST00000323434 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
RPH3AL-201ENST00000323434 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
RPH3AL-201ENST00000323434 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
RPH3AL-201ENST00000323434 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
RPH3AL-201ENST00000323434 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
RPH3AL-201ENST00000323434 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
RPH3AL-201ENST00000323434 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
RPH3AL-201ENST00000323434 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
RPH3AL-201ENST00000323434 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
RPH3AL-201ENST00000323434 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
RPH3AL-201ENST00000323434 CUX2O14529 1486 aa22.78■■□□□ 1.24
RPH3AL-201ENST00000323434 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
RPH3AL-201ENST00000323434 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
RPH3AL-201ENST00000323434 IGF1RP08069 1367 aa22.71■■□□□ 1.23
RPH3AL-201ENST00000323434 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
RPH3AL-201ENST00000323434 ARHGAP35Q9NRY4 1499 aa22.65■■□□□ 1.22
RPH3AL-201ENST00000323434 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
RPH3AL-201ENST00000323434 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
RPH3AL-201ENST00000323434 MIER1Q8N108 512 aa22.58■■□□□ 1.21
RPH3AL-201ENST00000323434 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
RPH3AL-201ENST00000323434 NESP48681 1621 aa22.55■■□□□ 1.2
RPH3AL-201ENST00000323434 ITGAEP38570 1179 aa22.53■■□□□ 1.2
RPH3AL-201ENST00000323434 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
RPH3AL-201ENST00000323434 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
RPH3AL-201ENST00000323434 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
RPH3AL-201ENST00000323434 RRBP1Q9P2E9 1410 aaKnown RBP22.45■■□□□ 1.18
RPH3AL-201ENST00000323434 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
RPH3AL-201ENST00000323434 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
RPH3AL-201ENST00000323434 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
RPH3AL-201ENST00000323434 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms