RNA–Protein interactions for RNA: ENST00000454741.5

TTC28-AS1-219, TTC28 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene TTC28-AS1, Length 5,064 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-219ENST00000454741 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
TTC28-AS1-219ENST00000454741 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
TTC28-AS1-219ENST00000454741 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
TTC28-AS1-219ENST00000454741 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
TTC28-AS1-219ENST00000454741 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
TTC28-AS1-219ENST00000454741 APLP2Q06481 763 aa23.95■■□□□ 1.42
TTC28-AS1-219ENST00000454741 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
TTC28-AS1-219ENST00000454741 FAM9AQ8IZU1 332 aaPredicted RBP23.64■■□□□ 1.37
TTC28-AS1-219ENST00000454741 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
TTC28-AS1-219ENST00000454741 PCGF6Q9BYE7 350 aa23.31■■□□□ 1.32
TTC28-AS1-219ENST00000454741 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
TTC28-AS1-219ENST00000454741 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
TTC28-AS1-219ENST00000454741 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.28
TTC28-AS1-219ENST00000454741 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
TTC28-AS1-219ENST00000454741 ERICH6Q7L0X2 663 aa22.93■■□□□ 1.26
TTC28-AS1-219ENST00000454741 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.26
TTC28-AS1-219ENST00000454741 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
TTC28-AS1-219ENST00000454741 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
TTC28-AS1-219ENST00000454741 NEFLP07196 543 aa22.72■■□□□ 1.23
TTC28-AS1-219ENST00000454741 MYT1Q01538 1121 aa22.59■■□□□ 1.21
TTC28-AS1-219ENST00000454741 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
TTC28-AS1-219ENST00000454741 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
TTC28-AS1-219ENST00000454741 HRCP23327 699 aa22.23■■□□□ 1.15
TTC28-AS1-219ENST00000454741 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
TTC28-AS1-219ENST00000454741 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
TTC28-AS1-219ENST00000454741 ABCC9O60706 1549 aa22.14■■□□□ 1.13
TTC28-AS1-219ENST00000454741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
TTC28-AS1-219ENST00000454741 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
TTC28-AS1-219ENST00000454741 DAXXQ9UER7 740 aaPredicted RBP22.04■■□□□ 1.12
TTC28-AS1-219ENST00000454741 ITGAEP38570 1179 aa22.03■■□□□ 1.12
TTC28-AS1-219ENST00000454741 MYT1LQ9UL68 1186 aa21.97■■□□□ 1.11
TTC28-AS1-219ENST00000454741 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
TTC28-AS1-219ENST00000454741 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
TTC28-AS1-219ENST00000454741 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
TTC28-AS1-219ENST00000454741 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
TTC28-AS1-219ENST00000454741 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.04
TTC28-AS1-219ENST00000454741 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
TTC28-AS1-219ENST00000454741 CNGB1Q14028 1251 aaPredicted RBP21.51■■□□□ 1.03
TTC28-AS1-219ENST00000454741 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
TTC28-AS1-219ENST00000454741 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
TTC28-AS1-219ENST00000454741 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
TTC28-AS1-219ENST00000454741 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
TTC28-AS1-219ENST00000454741 ANP32CO43423 234 aa21.38■■□□□ 1.01
TTC28-AS1-219ENST00000454741 FBLN2P98095 1184 aa21.34■■□□□ 1.01
TTC28-AS1-219ENST00000454741 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
TTC28-AS1-219ENST00000454741 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
TTC28-AS1-219ENST00000454741 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
TTC28-AS1-219ENST00000454741 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
TTC28-AS1-219ENST00000454741 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
TTC28-AS1-219ENST00000454741 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
TTC28-AS1-219ENST00000454741 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
TTC28-AS1-219ENST00000454741 NEFMP07197 916 aa21.06■□□□□ 0.96
TTC28-AS1-219ENST00000454741 BCANQ96GW7 911 aa21.04■□□□□ 0.96
TTC28-AS1-219ENST00000454741 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
TTC28-AS1-219ENST00000454741 CANXP27824 592 aaKnown RBP20.99■□□□□ 0.95
TTC28-AS1-219ENST00000454741 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
TTC28-AS1-219ENST00000454741 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
TTC28-AS1-219ENST00000454741 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.94
TTC28-AS1-219ENST00000454741 P3H3Q8IVL6 736 aa20.89■□□□□ 0.94
TTC28-AS1-219ENST00000454741 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
TTC28-AS1-219ENST00000454741 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
TTC28-AS1-219ENST00000454741 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
TTC28-AS1-219ENST00000454741 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
TTC28-AS1-219ENST00000454741 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
TTC28-AS1-219ENST00000454741 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
TTC28-AS1-219ENST00000454741 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
TTC28-AS1-219ENST00000454741 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
TTC28-AS1-219ENST00000454741 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
TTC28-AS1-219ENST00000454741 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
TTC28-AS1-219ENST00000454741 NACADO15069 1562 aa20.61■□□□□ 0.89
TTC28-AS1-219ENST00000454741 FKBP8Q14318 412 aa20.6■□□□□ 0.89
TTC28-AS1-219ENST00000454741 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
TTC28-AS1-219ENST00000454741 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
TTC28-AS1-219ENST00000454741 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.57■□□□□ 0.88
TTC28-AS1-219ENST00000454741 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
TTC28-AS1-219ENST00000454741 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
TTC28-AS1-219ENST00000454741 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
TTC28-AS1-219ENST00000454741 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
TTC28-AS1-219ENST00000454741 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
TTC28-AS1-219ENST00000454741 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
TTC28-AS1-219ENST00000454741 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.88
TTC28-AS1-219ENST00000454741 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
TTC28-AS1-219ENST00000454741 HSP90AA1P07900 732 aaKnown RBP20.51■□□□□ 0.87
TTC28-AS1-219ENST00000454741 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
TTC28-AS1-219ENST00000454741 EEA1Q15075 1411 aa20.48■□□□□ 0.87
TTC28-AS1-219ENST00000454741 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
TTC28-AS1-219ENST00000454741 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
TTC28-AS1-219ENST00000454741 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
TTC28-AS1-219ENST00000454741 CLIP1P30622 1438 aa20.43■□□□□ 0.86
TTC28-AS1-219ENST00000454741 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
TTC28-AS1-219ENST00000454741 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
TTC28-AS1-219ENST00000454741 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.858e-7■■■■■ 28.7
TTC28-AS1-219ENST00000454741 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
TTC28-AS1-219ENST00000454741 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
TTC28-AS1-219ENST00000454741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.85
TTC28-AS1-219ENST00000454741 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
TTC28-AS1-219ENST00000454741 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
TTC28-AS1-219ENST00000454741 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
TTC28-AS1-219ENST00000454741 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
TTC28-AS1-219ENST00000454741 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms