RNA–Protein interactions for RNA: ENST00000372103.1

NXT2-202, Transcript of nuclear transport factor 2 like export factor 2, humanhuman

TSL 1 (best) BASIC

Gene NXT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT2-202ENST00000372103 NISCHQ9Y2I1 1504 aa38.72■■■■□ 3.79
NXT2-202ENST00000372103 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
NXT2-202ENST00000372103 ABCC9O60706 1549 aa34.13■■■■□ 3.05
NXT2-202ENST00000372103 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.79
NXT2-202ENST00000372103 NACADO15069 1562 aa32.41■■■□□ 2.78
NXT2-202ENST00000372103 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
NXT2-202ENST00000372103 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
NXT2-202ENST00000372103 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
NXT2-202ENST00000372103 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
NXT2-202ENST00000372103 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
NXT2-202ENST00000372103 PABPN1Q86U42 306 aaKnown RBP eCLIP31.86■■■□□ 2.69
NXT2-202ENST00000372103 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
NXT2-202ENST00000372103 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
NXT2-202ENST00000372103 SCRIBQ14160 1630 aa31.55■■■□□ 2.64
NXT2-202ENST00000372103 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
NXT2-202ENST00000372103 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
NXT2-202ENST00000372103 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
NXT2-202ENST00000372103 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
NXT2-202ENST00000372103 AEBP2Q6ZN18 517 aaPredicted RBP30.6■■■□□ 2.49
NXT2-202ENST00000372103 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
NXT2-202ENST00000372103 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
NXT2-202ENST00000372103 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
NXT2-202ENST00000372103 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
NXT2-202ENST00000372103 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
NXT2-202ENST00000372103 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
NXT2-202ENST00000372103 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
NXT2-202ENST00000372103 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
NXT2-202ENST00000372103 BAZ1BQ9UIG0 1483 aaKnown RBP29.67■■■□□ 2.34
NXT2-202ENST00000372103 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
NXT2-202ENST00000372103 WIZO95785 1651 aa29.58■■■□□ 2.33
NXT2-202ENST00000372103 NESP48681 1621 aa29.56■■■□□ 2.32
NXT2-202ENST00000372103 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
NXT2-202ENST00000372103 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
NXT2-202ENST00000372103 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
NXT2-202ENST00000372103 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
NXT2-202ENST00000372103 THOC2Q8NI27 1593 aaKnown RBP29.1■■■□□ 2.25
NXT2-202ENST00000372103 KIF21AQ7Z4S6 1674 aa29.1■■■□□ 2.25
NXT2-202ENST00000372103 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
NXT2-202ENST00000372103 CUX2O14529 1486 aa29.05■■■□□ 2.24
NXT2-202ENST00000372103 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
NXT2-202ENST00000372103 CFTRP13569 1480 aa28.9■■■□□ 2.22
NXT2-202ENST00000372103 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
NXT2-202ENST00000372103 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
NXT2-202ENST00000372103 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
NXT2-202ENST00000372103 WDR62O43379 1518 aa28.74■■■□□ 2.19
NXT2-202ENST00000372103 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
NXT2-202ENST00000372103 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.17
NXT2-202ENST00000372103 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
NXT2-202ENST00000372103 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
NXT2-202ENST00000372103 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
NXT2-202ENST00000372103 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
NXT2-202ENST00000372103 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
NXT2-202ENST00000372103 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
NXT2-202ENST00000372103 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
NXT2-202ENST00000372103 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
NXT2-202ENST00000372103 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
NXT2-202ENST00000372103 CUX1P39880 1505 aa28.09■■■□□ 2.09
NXT2-202ENST00000372103 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
NXT2-202ENST00000372103 RAD54L2Q9Y4B4 1467 aa28.04■■■□□ 2.08
NXT2-202ENST00000372103 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
NXT2-202ENST00000372103 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
NXT2-202ENST00000372103 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.07
NXT2-202ENST00000372103 SOGA1O94964 1423 aa27.86■■■□□ 2.05
NXT2-202ENST00000372103 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
NXT2-202ENST00000372103 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
NXT2-202ENST00000372103 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
NXT2-202ENST00000372103 OSCARQ8IYS5 282 aa27.73■■■□□ 2.03
NXT2-202ENST00000372103 CHD1O14646 1710 aa27.71■■■□□ 2.03
NXT2-202ENST00000372103 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
NXT2-202ENST00000372103 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
NXT2-202ENST00000372103 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
NXT2-202ENST00000372103 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
NXT2-202ENST00000372103 ABCA10Q8WWZ4 1543 aa27.64■■■□□ 2.02
NXT2-202ENST00000372103 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
NXT2-202ENST00000372103 GRIN2BQ13224 1484 aa27.56■■■□□ 2
NXT2-202ENST00000372103 PBRM1Q86U86 1689 aa27.55■■■□□ 2
NXT2-202ENST00000372103 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
NXT2-202ENST00000372103 RIMBP3CA6NJZ7 1639 aa27.53■■■□□ 2
NXT2-202ENST00000372103 RIMBP3BA6NNM3 1639 aa27.53■■■□□ 2
NXT2-202ENST00000372103 RIMBP3Q9UFD9 1639 aa27.53■■■□□ 2
NXT2-202ENST00000372103 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
NXT2-202ENST00000372103 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
NXT2-202ENST00000372103 ARHGEF11O15085 1522 aa27.48■■□□□ 1.99
NXT2-202ENST00000372103 FBLN2P98095 1184 aa27.48■■□□□ 1.99
NXT2-202ENST00000372103 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
NXT2-202ENST00000372103 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
NXT2-202ENST00000372103 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
NXT2-202ENST00000372103 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
NXT2-202ENST00000372103 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
NXT2-202ENST00000372103 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
NXT2-202ENST00000372103 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
NXT2-202ENST00000372103 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
NXT2-202ENST00000372103 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
NXT2-202ENST00000372103 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
NXT2-202ENST00000372103 NUP160Q12769 1436 aa27.19■■□□□ 1.94
NXT2-202ENST00000372103 CYB5RLQ6IPT4 315 aa27.15■■□□□ 1.94
NXT2-202ENST00000372103 IGF1RP08069 1367 aa27.09■■□□□ 1.93
NXT2-202ENST00000372103 SHROOM2Q13796 1616 aa27.03■■□□□ 1.92
NXT2-202ENST00000372103 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
NXT2-202ENST00000372103 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms