RNA–Protein interactions for RNA: ENST00000474951.1

KCNC3-202, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

TSL 2 BASIC

Gene KCNC3, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-202ENST00000474951 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
KCNC3-202ENST00000474951 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
KCNC3-202ENST00000474951 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
KCNC3-202ENST00000474951 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
KCNC3-202ENST00000474951 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
KCNC3-202ENST00000474951 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
KCNC3-202ENST00000474951 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
KCNC3-202ENST00000474951 ABCC9O60706 1549 aa25.69■■□□□ 1.7
KCNC3-202ENST00000474951 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
KCNC3-202ENST00000474951 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
KCNC3-202ENST00000474951 HRCP23327 699 aa25.13■■□□□ 1.61
KCNC3-202ENST00000474951 NACADO15069 1562 aa25.12■■□□□ 1.61
KCNC3-202ENST00000474951 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
KCNC3-202ENST00000474951 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
KCNC3-202ENST00000474951 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
KCNC3-202ENST00000474951 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
KCNC3-202ENST00000474951 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
KCNC3-202ENST00000474951 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
KCNC3-202ENST00000474951 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
KCNC3-202ENST00000474951 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
KCNC3-202ENST00000474951 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
KCNC3-202ENST00000474951 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
KCNC3-202ENST00000474951 WIZO95785 1651 aa24.23■■□□□ 1.47
KCNC3-202ENST00000474951 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
KCNC3-202ENST00000474951 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
KCNC3-202ENST00000474951 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
KCNC3-202ENST00000474951 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
KCNC3-202ENST00000474951 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
KCNC3-202ENST00000474951 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
KCNC3-202ENST00000474951 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
KCNC3-202ENST00000474951 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
KCNC3-202ENST00000474951 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
KCNC3-202ENST00000474951 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
KCNC3-202ENST00000474951 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
KCNC3-202ENST00000474951 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
KCNC3-202ENST00000474951 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
KCNC3-202ENST00000474951 MYT1Q01538 1121 aa23.64■■□□□ 1.37
KCNC3-202ENST00000474951 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
KCNC3-202ENST00000474951 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
KCNC3-202ENST00000474951 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
KCNC3-202ENST00000474951 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
KCNC3-202ENST00000474951 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
KCNC3-202ENST00000474951 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
KCNC3-202ENST00000474951 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
KCNC3-202ENST00000474951 SOGA1O94964 1423 aa23.22■■□□□ 1.31
KCNC3-202ENST00000474951 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.312e-8■■■□□ 16.7
KCNC3-202ENST00000474951 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
KCNC3-202ENST00000474951 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
KCNC3-202ENST00000474951 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
KCNC3-202ENST00000474951 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
KCNC3-202ENST00000474951 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
KCNC3-202ENST00000474951 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.28
KCNC3-202ENST00000474951 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
KCNC3-202ENST00000474951 EEA1Q15075 1411 aa23.02■■□□□ 1.28
KCNC3-202ENST00000474951 GTF3C3Q9Y5Q9 886 aa23■■□□□ 1.27
KCNC3-202ENST00000474951 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
KCNC3-202ENST00000474951 CENPBP07199 599 aaPredicted RBP22.94■■□□□ 1.26
KCNC3-202ENST00000474951 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
KCNC3-202ENST00000474951 CFTRP13569 1480 aa22.86■■□□□ 1.25
KCNC3-202ENST00000474951 CEP162Q5TB80 1403 aa22.83■■□□□ 1.25
KCNC3-202ENST00000474951 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
KCNC3-202ENST00000474951 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
KCNC3-202ENST00000474951 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
KCNC3-202ENST00000474951 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
KCNC3-202ENST00000474951 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
KCNC3-202ENST00000474951 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
KCNC3-202ENST00000474951 CUX1P39880 1505 aa22.74■■□□□ 1.23
KCNC3-202ENST00000474951 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
KCNC3-202ENST00000474951 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
KCNC3-202ENST00000474951 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
KCNC3-202ENST00000474951 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
KCNC3-202ENST00000474951 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
KCNC3-202ENST00000474951 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
KCNC3-202ENST00000474951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
KCNC3-202ENST00000474951 KIF21BO75037 1637 aa22.63■■□□□ 1.21
KCNC3-202ENST00000474951 NESP48681 1621 aa22.56■■□□□ 1.2
KCNC3-202ENST00000474951 CLIP1P30622 1438 aa22.55■■□□□ 1.2
KCNC3-202ENST00000474951 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
KCNC3-202ENST00000474951 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
KCNC3-202ENST00000474951 CUX2O14529 1486 aa22.46■■□□□ 1.19
KCNC3-202ENST00000474951 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
KCNC3-202ENST00000474951 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
KCNC3-202ENST00000474951 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
KCNC3-202ENST00000474951 IGF1RP08069 1367 aa22.36■■□□□ 1.17
KCNC3-202ENST00000474951 APLP2Q06481 763 aa22.36■■□□□ 1.17
KCNC3-202ENST00000474951 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
KCNC3-202ENST00000474951 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.16
KCNC3-202ENST00000474951 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
KCNC3-202ENST00000474951 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
KCNC3-202ENST00000474951 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
KCNC3-202ENST00000474951 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
KCNC3-202ENST00000474951 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
KCNC3-202ENST00000474951 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
KCNC3-202ENST00000474951 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
KCNC3-202ENST00000474951 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
KCNC3-202ENST00000474951 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
KCNC3-202ENST00000474951 ARAP1Q96P48 1450 aa22.19■■□□□ 1.14
KCNC3-202ENST00000474951 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
KCNC3-202ENST00000474951 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
KCNC3-202ENST00000474951 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms