RNA–Protein interactions for RNA: ENST00000507910.5

NEK11-205, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK11, Length 1,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-205ENST00000507910 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
NEK11-205ENST00000507910 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
NEK11-205ENST00000507910 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.08
NEK11-205ENST00000507910 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
NEK11-205ENST00000507910 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
NEK11-205ENST00000507910 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
NEK11-205ENST00000507910 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
NEK11-205ENST00000507910 ABCC9O60706 1549 aa26.76■■□□□ 1.87
NEK11-205ENST00000507910 NACADO15069 1562 aa26.71■■□□□ 1.87
NEK11-205ENST00000507910 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
NEK11-205ENST00000507910 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
NEK11-205ENST00000507910 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
NEK11-205ENST00000507910 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
NEK11-205ENST00000507910 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
NEK11-205ENST00000507910 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
NEK11-205ENST00000507910 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
NEK11-205ENST00000507910 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
NEK11-205ENST00000507910 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
NEK11-205ENST00000507910 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.67
NEK11-205ENST00000507910 WIZO95785 1651 aa25.45■■□□□ 1.66
NEK11-205ENST00000507910 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
NEK11-205ENST00000507910 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
NEK11-205ENST00000507910 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
NEK11-205ENST00000507910 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
NEK11-205ENST00000507910 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
NEK11-205ENST00000507910 SMARCA2P51531 1590 aa25.02■■□□□ 1.6
NEK11-205ENST00000507910 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
NEK11-205ENST00000507910 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
NEK11-205ENST00000507910 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
NEK11-205ENST00000507910 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
NEK11-205ENST00000507910 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
NEK11-205ENST00000507910 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
NEK11-205ENST00000507910 HMGXB3Q12766 1538 aa24.64■■□□□ 1.54
NEK11-205ENST00000507910 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
NEK11-205ENST00000507910 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
NEK11-205ENST00000507910 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
NEK11-205ENST00000507910 EEA1Q15075 1411 aa24.38■■□□□ 1.49
NEK11-205ENST00000507910 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
NEK11-205ENST00000507910 SOGA1O94964 1423 aa24.25■■□□□ 1.47
NEK11-205ENST00000507910 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
NEK11-205ENST00000507910 CFTRP13569 1480 aa24.22■■□□□ 1.47
NEK11-205ENST00000507910 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
NEK11-205ENST00000507910 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
NEK11-205ENST00000507910 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
NEK11-205ENST00000507910 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
NEK11-205ENST00000507910 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
NEK11-205ENST00000507910 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
NEK11-205ENST00000507910 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
NEK11-205ENST00000507910 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
NEK11-205ENST00000507910 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
NEK11-205ENST00000507910 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
NEK11-205ENST00000507910 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
NEK11-205ENST00000507910 KIF21BO75037 1637 aa23.98■■□□□ 1.43
NEK11-205ENST00000507910 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
NEK11-205ENST00000507910 CUX1P39880 1505 aa23.98■■□□□ 1.43
NEK11-205ENST00000507910 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
NEK11-205ENST00000507910 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
NEK11-205ENST00000507910 HRCP23327 699 aa23.83■■□□□ 1.41
NEK11-205ENST00000507910 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
NEK11-205ENST00000507910 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
NEK11-205ENST00000507910 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
NEK11-205ENST00000507910 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
NEK11-205ENST00000507910 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
NEK11-205ENST00000507910 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
NEK11-205ENST00000507910 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
NEK11-205ENST00000507910 CLIP1P30622 1438 aa23.64■■□□□ 1.38
NEK11-205ENST00000507910 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
NEK11-205ENST00000507910 NESP48681 1621 aa23.61■■□□□ 1.37
NEK11-205ENST00000507910 CUX2O14529 1486 aa23.6■■□□□ 1.37
NEK11-205ENST00000507910 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
NEK11-205ENST00000507910 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
NEK11-205ENST00000507910 IGF1RP08069 1367 aa23.52■■□□□ 1.36
NEK11-205ENST00000507910 VPS8Q8N3P4 1428 aa23.51■■□□□ 1.35
NEK11-205ENST00000507910 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
NEK11-205ENST00000507910 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
NEK11-205ENST00000507910 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
NEK11-205ENST00000507910 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
NEK11-205ENST00000507910 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
NEK11-205ENST00000507910 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
NEK11-205ENST00000507910 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
NEK11-205ENST00000507910 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
NEK11-205ENST00000507910 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
NEK11-205ENST00000507910 APLP2Q06481 763 aa23.32■■□□□ 1.32
NEK11-205ENST00000507910 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
NEK11-205ENST00000507910 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
NEK11-205ENST00000507910 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
NEK11-205ENST00000507910 CUL7Q14999 1698 aa23.28■■□□□ 1.32
NEK11-205ENST00000507910 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
NEK11-205ENST00000507910 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
NEK11-205ENST00000507910 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
NEK11-205ENST00000507910 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
NEK11-205ENST00000507910 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
NEK11-205ENST00000507910 TARBP1Q13395 1621 aaKnown RBP23.14■■□□□ 1.3
NEK11-205ENST00000507910 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
NEK11-205ENST00000507910 EFCAB5A4FU69 1503 aa23.07■■□□□ 1.28
NEK11-205ENST00000507910 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
NEK11-205ENST00000507910 WDR62O43379 1518 aa23.05■■□□□ 1.28
NEK11-205ENST00000507910 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
NEK11-205ENST00000507910 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
NEK11-205ENST00000507910 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms