RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
IFT20-208ENST00000578985 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
IFT20-208ENST00000578985 ABCC9O60706 1549 aa31.93■■■□□ 2.7
IFT20-208ENST00000578985 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
IFT20-208ENST00000578985 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
IFT20-208ENST00000578985 NACADO15069 1562 aa30.81■■■□□ 2.52
IFT20-208ENST00000578985 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
IFT20-208ENST00000578985 MYO15BQ96JP2 1530 aa30.66■■■□□ 2.5
IFT20-208ENST00000578985 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
IFT20-208ENST00000578985 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
IFT20-208ENST00000578985 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
IFT20-208ENST00000578985 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
IFT20-208ENST00000578985 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
IFT20-208ENST00000578985 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
IFT20-208ENST00000578985 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
IFT20-208ENST00000578985 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
IFT20-208ENST00000578985 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
IFT20-208ENST00000578985 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
IFT20-208ENST00000578985 SMARCA4P51532 1647 aa28.68■■■□□ 2.18
IFT20-208ENST00000578985 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
IFT20-208ENST00000578985 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
IFT20-208ENST00000578985 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
IFT20-208ENST00000578985 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
IFT20-208ENST00000578985 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
IFT20-208ENST00000578985 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
IFT20-208ENST00000578985 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
IFT20-208ENST00000578985 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
IFT20-208ENST00000578985 WIZO95785 1651 aa28.25■■■□□ 2.11
IFT20-208ENST00000578985 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
IFT20-208ENST00000578985 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
IFT20-208ENST00000578985 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
IFT20-208ENST00000578985 NESP48681 1621 aa27.68■■■□□ 2.02
IFT20-208ENST00000578985 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.01
IFT20-208ENST00000578985 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
IFT20-208ENST00000578985 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
IFT20-208ENST00000578985 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
IFT20-208ENST00000578985 CFTRP13569 1480 aa27.47■■□□□ 1.99
IFT20-208ENST00000578985 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
IFT20-208ENST00000578985 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.97
IFT20-208ENST00000578985 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
IFT20-208ENST00000578985 DNAJC5Q9H3Z4 198 aa27.33■■□□□ 1.97
IFT20-208ENST00000578985 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
IFT20-208ENST00000578985 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
IFT20-208ENST00000578985 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
IFT20-208ENST00000578985 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
IFT20-208ENST00000578985 CUX2O14529 1486 aa27.13■■□□□ 1.93
IFT20-208ENST00000578985 WDR62O43379 1518 aa27.06■■□□□ 1.92
IFT20-208ENST00000578985 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
IFT20-208ENST00000578985 ABCC8Q09428 1581 aa26.89■■□□□ 1.9
IFT20-208ENST00000578985 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
IFT20-208ENST00000578985 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
IFT20-208ENST00000578985 CUX1P39880 1505 aa26.75■■□□□ 1.87
IFT20-208ENST00000578985 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
IFT20-208ENST00000578985 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
IFT20-208ENST00000578985 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
IFT20-208ENST00000578985 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
IFT20-208ENST00000578985 BIVM-ERCC5R4GMW8 1640 aa26.58■■□□□ 1.85
IFT20-208ENST00000578985 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
IFT20-208ENST00000578985 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
IFT20-208ENST00000578985 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
IFT20-208ENST00000578985 SOGA1O94964 1423 aa26.56■■□□□ 1.84
IFT20-208ENST00000578985 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
IFT20-208ENST00000578985 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
IFT20-208ENST00000578985 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
IFT20-208ENST00000578985 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
IFT20-208ENST00000578985 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
IFT20-208ENST00000578985 TDRD9Q8NDG6 1382 aaKnown RBP26.39■■□□□ 1.82
IFT20-208ENST00000578985 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
IFT20-208ENST00000578985 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
IFT20-208ENST00000578985 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
IFT20-208ENST00000578985 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
IFT20-208ENST00000578985 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
IFT20-208ENST00000578985 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
IFT20-208ENST00000578985 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
IFT20-208ENST00000578985 MAGI1Q96QZ7 1491 aaPredicted RBP26.13■■□□□ 1.77
IFT20-208ENST00000578985 CHD1O14646 1710 aa26.09■■□□□ 1.77
IFT20-208ENST00000578985 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
IFT20-208ENST00000578985 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
IFT20-208ENST00000578985 FBLN2P98095 1184 aa26.06■■□□□ 1.76
IFT20-208ENST00000578985 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
IFT20-208ENST00000578985 SYNJ2O15056 1496 aa26.03■■□□□ 1.76
IFT20-208ENST00000578985 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
IFT20-208ENST00000578985 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
IFT20-208ENST00000578985 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
IFT20-208ENST00000578985 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
IFT20-208ENST00000578985 IGF1RP08069 1367 aa25.95■■□□□ 1.74
IFT20-208ENST00000578985 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
IFT20-208ENST00000578985 CUL7Q14999 1698 aa25.88■■□□□ 1.73
IFT20-208ENST00000578985 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
IFT20-208ENST00000578985 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
IFT20-208ENST00000578985 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
IFT20-208ENST00000578985 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
IFT20-208ENST00000578985 NUP160Q12769 1436 aa25.75■■□□□ 1.71
IFT20-208ENST00000578985 EEA1Q15075 1411 aa25.71■■□□□ 1.71
IFT20-208ENST00000578985 RAPGEF2Q9Y4G8 1499 aa25.67■■□□□ 1.7
IFT20-208ENST00000578985 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
IFT20-208ENST00000578985 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
IFT20-208ENST00000578985 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
IFT20-208ENST00000578985 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
IFT20-208ENST00000578985 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms