RNA–Protein interactions for RNA: ENST00000268638.9

IRF8-201, Transcript of interferon regulatory factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF8, Length 3,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-201ENST00000268638 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
IRF8-201ENST00000268638 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
IRF8-201ENST00000268638 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
IRF8-201ENST00000268638 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
IRF8-201ENST00000268638 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
IRF8-201ENST00000268638 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
IRF8-201ENST00000268638 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
IRF8-201ENST00000268638 ABCC9O60706 1549 aa25.83■■□□□ 1.73
IRF8-201ENST00000268638 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
IRF8-201ENST00000268638 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
IRF8-201ENST00000268638 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
IRF8-201ENST00000268638 NACADO15069 1562 aa25.42■■□□□ 1.66
IRF8-201ENST00000268638 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.65
IRF8-201ENST00000268638 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
IRF8-201ENST00000268638 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
IRF8-201ENST00000268638 RB1CC1Q8TDY2 1594 aa25.08■■□□□ 1.61
IRF8-201ENST00000268638 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
IRF8-201ENST00000268638 WIZO95785 1651 aa24.87■■□□□ 1.57
IRF8-201ENST00000268638 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
IRF8-201ENST00000268638 FAM9AQ8IZU1 332 aaPredicted RBP24.76■■□□□ 1.55
IRF8-201ENST00000268638 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
IRF8-201ENST00000268638 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
IRF8-201ENST00000268638 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
IRF8-201ENST00000268638 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
IRF8-201ENST00000268638 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
IRF8-201ENST00000268638 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
IRF8-201ENST00000268638 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.51
IRF8-201ENST00000268638 TOP2AP11388 1531 aaKnown RBP24.41■■□□□ 1.5
IRF8-201ENST00000268638 HRCP23327 699 aa24.41■■□□□ 1.5
IRF8-201ENST00000268638 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.49
IRF8-201ENST00000268638 EIF4G1Q04637 1599 aaKnown RBP24.31■■□□□ 1.48
IRF8-201ENST00000268638 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
IRF8-201ENST00000268638 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
IRF8-201ENST00000268638 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
IRF8-201ENST00000268638 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
IRF8-201ENST00000268638 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
IRF8-201ENST00000268638 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
IRF8-201ENST00000268638 SOGA1O94964 1423 aa24■■□□□ 1.43
IRF8-201ENST00000268638 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
IRF8-201ENST00000268638 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
IRF8-201ENST00000268638 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
IRF8-201ENST00000268638 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
IRF8-201ENST00000268638 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
IRF8-201ENST00000268638 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
IRF8-201ENST00000268638 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
IRF8-201ENST00000268638 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
IRF8-201ENST00000268638 EEA1Q15075 1411 aa23.66■■□□□ 1.38
IRF8-201ENST00000268638 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.37
IRF8-201ENST00000268638 NCAPD3P42695 1498 aa23.58■■□□□ 1.36
IRF8-201ENST00000268638 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
IRF8-201ENST00000268638 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
IRF8-201ENST00000268638 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
IRF8-201ENST00000268638 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
IRF8-201ENST00000268638 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
IRF8-201ENST00000268638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
IRF8-201ENST00000268638 TOP2BQ02880 1626 aa23.4■■□□□ 1.34
IRF8-201ENST00000268638 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
IRF8-201ENST00000268638 KIF21BO75037 1637 aa23.35■■□□□ 1.33
IRF8-201ENST00000268638 CLIP1P30622 1438 aa23.32■■□□□ 1.32
IRF8-201ENST00000268638 CFTRP13569 1480 aa23.32■■□□□ 1.32
IRF8-201ENST00000268638 CUX1P39880 1505 aa23.31■■□□□ 1.32
IRF8-201ENST00000268638 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
IRF8-201ENST00000268638 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
IRF8-201ENST00000268638 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
IRF8-201ENST00000268638 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
IRF8-201ENST00000268638 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.3
IRF8-201ENST00000268638 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
IRF8-201ENST00000268638 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
IRF8-201ENST00000268638 APLP2Q06481 763 aa23.1■■□□□ 1.29
IRF8-201ENST00000268638 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
IRF8-201ENST00000268638 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
IRF8-201ENST00000268638 CUX2O14529 1486 aa23.01■■□□□ 1.27
IRF8-201ENST00000268638 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
IRF8-201ENST00000268638 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
IRF8-201ENST00000268638 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
IRF8-201ENST00000268638 IGF1RP08069 1367 aa22.95■■□□□ 1.26
IRF8-201ENST00000268638 NESP48681 1621 aa22.93■■□□□ 1.26
IRF8-201ENST00000268638 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
IRF8-201ENST00000268638 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
IRF8-201ENST00000268638 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
IRF8-201ENST00000268638 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
IRF8-201ENST00000268638 ARHGAP35Q9NRY4 1499 aa22.83■■□□□ 1.25
IRF8-201ENST00000268638 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
IRF8-201ENST00000268638 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
IRF8-201ENST00000268638 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
IRF8-201ENST00000268638 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
IRF8-201ENST00000268638 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
IRF8-201ENST00000268638 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.22
IRF8-201ENST00000268638 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
IRF8-201ENST00000268638 ITGAEP38570 1179 aa22.63■■□□□ 1.21
IRF8-201ENST00000268638 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
IRF8-201ENST00000268638 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
IRF8-201ENST00000268638 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
IRF8-201ENST00000268638 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
IRF8-201ENST00000268638 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
IRF8-201ENST00000268638 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
IRF8-201ENST00000268638 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
IRF8-201ENST00000268638 CCNB3Q8WWL7 1395 aa22.52■■□□□ 1.2
IRF8-201ENST00000268638 FHOD3Q2V2M9 1422 aa22.52■■□□□ 1.2
IRF8-201ENST00000268638 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms