RNA–Protein interactions for RNA: ENST00000302904.8

UBTF-201, Transcript of upstream binding transcription factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBTF, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-201ENST00000302904 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
UBTF-201ENST00000302904 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
UBTF-201ENST00000302904 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
UBTF-201ENST00000302904 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
UBTF-201ENST00000302904 MYT1Q01538 1121 aa24.75■■□□□ 1.55
UBTF-201ENST00000302904 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
UBTF-201ENST00000302904 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
UBTF-201ENST00000302904 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
UBTF-201ENST00000302904 APLP2Q06481 763 aa23.48■■□□□ 1.35
UBTF-201ENST00000302904 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
UBTF-201ENST00000302904 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
UBTF-201ENST00000302904 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
UBTF-201ENST00000302904 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
UBTF-201ENST00000302904 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
UBTF-201ENST00000302904 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
UBTF-201ENST00000302904 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
UBTF-201ENST00000302904 HRCP23327 699 aa22.93■■□□□ 1.26
UBTF-201ENST00000302904 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
UBTF-201ENST00000302904 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
UBTF-201ENST00000302904 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
UBTF-201ENST00000302904 ABCC9O60706 1549 aa22.65■■□□□ 1.22
UBTF-201ENST00000302904 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
UBTF-201ENST00000302904 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
UBTF-201ENST00000302904 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
UBTF-201ENST00000302904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
UBTF-201ENST00000302904 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
UBTF-201ENST00000302904 NEFLP07196 543 aa22.16■■□□□ 1.14
UBTF-201ENST00000302904 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
UBTF-201ENST00000302904 MYT1LQ9UL68 1186 aa22.1■■□□□ 1.13
UBTF-201ENST00000302904 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
UBTF-201ENST00000302904 ITGAEP38570 1179 aa22.02■■□□□ 1.12
UBTF-201ENST00000302904 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
UBTF-201ENST00000302904 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
UBTF-201ENST00000302904 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
UBTF-201ENST00000302904 FBLN2P98095 1184 aa21.69■■□□□ 1.06
UBTF-201ENST00000302904 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
UBTF-201ENST00000302904 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
UBTF-201ENST00000302904 POLR3GLQ9BT43 218 aa21.61■■□□□ 1.05
UBTF-201ENST00000302904 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.04
UBTF-201ENST00000302904 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
UBTF-201ENST00000302904 FAM50AQ14320 339 aaKnown RBP21.53■■□□□ 1.04
UBTF-201ENST00000302904 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
UBTF-201ENST00000302904 CNGB1Q14028 1251 aaPredicted RBP21.38■■□□□ 1.01
UBTF-201ENST00000302904 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
UBTF-201ENST00000302904 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
UBTF-201ENST00000302904 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
UBTF-201ENST00000302904 P3H3Q8IVL6 736 aa21.32■■□□□ 1
UBTF-201ENST00000302904 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
UBTF-201ENST00000302904 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
UBTF-201ENST00000302904 CCDC180Q9P1Z9 1646 aa21.28■■□□□ 1
UBTF-201ENST00000302904 ARID3CA6NKF2 412 aa21.28■■□□□ 1
UBTF-201ENST00000302904 EIF5BO60841 1220 aaKnown RBP21.28■■□□□ 1
UBTF-201ENST00000302904 GLIPR1L2Q4G1C9 344 aa21.25■□□□□ 0.99
UBTF-201ENST00000302904 NEUROD1Q13562 356 aa21.2■□□□□ 0.98
UBTF-201ENST00000302904 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
UBTF-201ENST00000302904 BCANQ96GW7 911 aa21.15■□□□□ 0.98
UBTF-201ENST00000302904 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.98
UBTF-201ENST00000302904 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
UBTF-201ENST00000302904 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.97
UBTF-201ENST00000302904 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
UBTF-201ENST00000302904 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
UBTF-201ENST00000302904 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
UBTF-201ENST00000302904 NPM1P06748 294 aaKnown RBP eCLIP20.94■□□□□ 0.94
UBTF-201ENST00000302904 NACADO15069 1562 aa20.85■□□□□ 0.93
UBTF-201ENST00000302904 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
UBTF-201ENST00000302904 ESF1Q9H501 851 aaKnown RBP20.82■□□□□ 0.92
UBTF-201ENST00000302904 ANP32AP39687 249 aaKnown RBP20.75■□□□□ 0.91
UBTF-201ENST00000302904 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
UBTF-201ENST00000302904 ANP32CO43423 234 aa20.68■□□□□ 0.9
UBTF-201ENST00000302904 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
UBTF-201ENST00000302904 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
UBTF-201ENST00000302904 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
UBTF-201ENST00000302904 STAG3Q9UJ98 1225 aa20.64■□□□□ 0.89
UBTF-201ENST00000302904 FKBP8Q14318 412 aa20.63■□□□□ 0.89
UBTF-201ENST00000302904 NBR1Q14596 966 aa20.61■□□□□ 0.89
UBTF-201ENST00000302904 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
UBTF-201ENST00000302904 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.88
UBTF-201ENST00000302904 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
UBTF-201ENST00000302904 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
UBTF-201ENST00000302904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.886e-7■■■■□ 22.7
UBTF-201ENST00000302904 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
UBTF-201ENST00000302904 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
UBTF-201ENST00000302904 NEFMP07197 916 aa20.5■□□□□ 0.87
UBTF-201ENST00000302904 TONSLQ96HA7 1378 aa20.5■□□□□ 0.87
UBTF-201ENST00000302904 CLIP1P30622 1438 aa20.5■□□□□ 0.87
UBTF-201ENST00000302904 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
UBTF-201ENST00000302904 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
UBTF-201ENST00000302904 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
UBTF-201ENST00000302904 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
UBTF-201ENST00000302904 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
UBTF-201ENST00000302904 PRKCSHP14314 528 aaPredicted RBP20.43■□□□□ 0.86
UBTF-201ENST00000302904 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
UBTF-201ENST00000302904 EEA1Q15075 1411 aa20.42■□□□□ 0.86
UBTF-201ENST00000302904 ZBTB47Q9UFB7 747 aaPredicted RBP20.41■□□□□ 0.86
UBTF-201ENST00000302904 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
UBTF-201ENST00000302904 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
UBTF-201ENST00000302904 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
UBTF-201ENST00000302904 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
UBTF-201ENST00000302904 RTN4Q9NQC3 1192 aaKnown RBP20.33■□□□□ 0.85
UBTF-201ENST00000302904 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms