RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
RTP1-201ENST00000312295 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
RTP1-201ENST00000312295 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
RTP1-201ENST00000312295 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
RTP1-201ENST00000312295 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
RTP1-201ENST00000312295 ABCC9O60706 1549 aa28.22■■■□□ 2.11
RTP1-201ENST00000312295 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
RTP1-201ENST00000312295 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
RTP1-201ENST00000312295 NACADO15069 1562 aa27.56■■■□□ 2
RTP1-201ENST00000312295 SCRIBQ14160 1630 aa27.52■■■□□ 2
RTP1-201ENST00000312295 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
RTP1-201ENST00000312295 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
RTP1-201ENST00000312295 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
RTP1-201ENST00000312295 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
RTP1-201ENST00000312295 CECR2Q9BXF3 1484 aa26.63■■□□□ 1.85
RTP1-201ENST00000312295 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
RTP1-201ENST00000312295 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
RTP1-201ENST00000312295 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
RTP1-201ENST00000312295 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
RTP1-201ENST00000312295 WIZO95785 1651 aa26.28■■□□□ 1.8
RTP1-201ENST00000312295 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
RTP1-201ENST00000312295 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.73
RTP1-201ENST00000312295 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
RTP1-201ENST00000312295 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
RTP1-201ENST00000312295 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
RTP1-201ENST00000312295 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
RTP1-201ENST00000312295 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
RTP1-201ENST00000312295 CCDC88BA6NC98 1476 aa25.67■■□□□ 1.7
RTP1-201ENST00000312295 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
RTP1-201ENST00000312295 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
RTP1-201ENST00000312295 NCAPD3P42695 1498 aa25.45■■□□□ 1.66
RTP1-201ENST00000312295 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
RTP1-201ENST00000312295 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
RTP1-201ENST00000312295 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
RTP1-201ENST00000312295 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
RTP1-201ENST00000312295 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
RTP1-201ENST00000312295 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
RTP1-201ENST00000312295 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
RTP1-201ENST00000312295 CFTRP13569 1480 aa24.95■■□□□ 1.59
RTP1-201ENST00000312295 SYNJ1O43426 1573 aa24.95■■□□□ 1.59
RTP1-201ENST00000312295 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
RTP1-201ENST00000312295 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
RTP1-201ENST00000312295 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
RTP1-201ENST00000312295 NESP48681 1621 aa24.81■■□□□ 1.56
RTP1-201ENST00000312295 SOGA1O94964 1423 aa24.79■■□□□ 1.56
RTP1-201ENST00000312295 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
RTP1-201ENST00000312295 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
RTP1-201ENST00000312295 CUX1P39880 1505 aa24.72■■□□□ 1.55
RTP1-201ENST00000312295 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
RTP1-201ENST00000312295 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
RTP1-201ENST00000312295 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
RTP1-201ENST00000312295 EEA1Q15075 1411 aa24.5■■□□□ 1.51
RTP1-201ENST00000312295 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
RTP1-201ENST00000312295 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
RTP1-201ENST00000312295 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
RTP1-201ENST00000312295 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
RTP1-201ENST00000312295 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
RTP1-201ENST00000312295 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
RTP1-201ENST00000312295 TOPBP1Q92547 1522 aa24.39■■□□□ 1.5
RTP1-201ENST00000312295 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
RTP1-201ENST00000312295 CUX2O14529 1486 aa24.31■■□□□ 1.48
RTP1-201ENST00000312295 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
RTP1-201ENST00000312295 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
RTP1-201ENST00000312295 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
RTP1-201ENST00000312295 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
RTP1-201ENST00000312295 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
RTP1-201ENST00000312295 KIF21BO75037 1637 aa24.28■■□□□ 1.48
RTP1-201ENST00000312295 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
RTP1-201ENST00000312295 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
RTP1-201ENST00000312295 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
RTP1-201ENST00000312295 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
RTP1-201ENST00000312295 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
RTP1-201ENST00000312295 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
RTP1-201ENST00000312295 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
RTP1-201ENST00000312295 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
RTP1-201ENST00000312295 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
RTP1-201ENST00000312295 IGF1RP08069 1367 aa24.08■■□□□ 1.45
RTP1-201ENST00000312295 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
RTP1-201ENST00000312295 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
RTP1-201ENST00000312295 WDR62O43379 1518 aa24.01■■□□□ 1.43
RTP1-201ENST00000312295 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
RTP1-201ENST00000312295 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
RTP1-201ENST00000312295 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
RTP1-201ENST00000312295 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
RTP1-201ENST00000312295 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
RTP1-201ENST00000312295 CLIP1P30622 1438 aa23.96■■□□□ 1.43
RTP1-201ENST00000312295 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
RTP1-201ENST00000312295 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
RTP1-201ENST00000312295 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.41
RTP1-201ENST00000312295 CUL7Q14999 1698 aa23.86■■□□□ 1.41
RTP1-201ENST00000312295 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
RTP1-201ENST00000312295 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.41
RTP1-201ENST00000312295 PBRM1Q86U86 1689 aa23.83■■□□□ 1.41
RTP1-201ENST00000312295 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
RTP1-201ENST00000312295 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
RTP1-201ENST00000312295 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
RTP1-201ENST00000312295 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
RTP1-201ENST00000312295 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
RTP1-201ENST00000312295 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.38
RTP1-201ENST00000312295 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms