RNA–Protein interactions for RNA: ENST00000222271.6

COMP-201, Transcript of cartilage oligomeric matrix protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMP, Length 2,461 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMP-201ENST00000222271 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
COMP-201ENST00000222271 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
COMP-201ENST00000222271 ABCC9O60706 1549 aa26.77■■□□□ 1.88
COMP-201ENST00000222271 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
COMP-201ENST00000222271 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
COMP-201ENST00000222271 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
COMP-201ENST00000222271 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
COMP-201ENST00000222271 NACADO15069 1562 aa25.93■■□□□ 1.74
COMP-201ENST00000222271 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
COMP-201ENST00000222271 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.73
COMP-201ENST00000222271 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
COMP-201ENST00000222271 SCRIBQ14160 1630 aa25.72■■□□□ 1.71
COMP-201ENST00000222271 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
COMP-201ENST00000222271 HRCP23327 699 aa25.33■■□□□ 1.65
COMP-201ENST00000222271 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
COMP-201ENST00000222271 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
COMP-201ENST00000222271 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
COMP-201ENST00000222271 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
COMP-201ENST00000222271 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
COMP-201ENST00000222271 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
COMP-201ENST00000222271 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
COMP-201ENST00000222271 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.53
COMP-201ENST00000222271 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
COMP-201ENST00000222271 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
COMP-201ENST00000222271 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
COMP-201ENST00000222271 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
COMP-201ENST00000222271 WIZO95785 1651 aa24.47■■□□□ 1.51
COMP-201ENST00000222271 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
COMP-201ENST00000222271 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
COMP-201ENST00000222271 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
COMP-201ENST00000222271 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
COMP-201ENST00000222271 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
COMP-201ENST00000222271 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
COMP-201ENST00000222271 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.44
COMP-201ENST00000222271 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.44
COMP-201ENST00000222271 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
COMP-201ENST00000222271 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
COMP-201ENST00000222271 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
COMP-201ENST00000222271 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
COMP-201ENST00000222271 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
COMP-201ENST00000222271 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
COMP-201ENST00000222271 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
COMP-201ENST00000222271 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
COMP-201ENST00000222271 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
COMP-201ENST00000222271 MYT1Q01538 1121 aa23.58■■□□□ 1.37
COMP-201ENST00000222271 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
COMP-201ENST00000222271 NESP48681 1621 aa23.42■■□□□ 1.34
COMP-201ENST00000222271 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
COMP-201ENST00000222271 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
COMP-201ENST00000222271 CFTRP13569 1480 aa23.4■■□□□ 1.34
COMP-201ENST00000222271 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
COMP-201ENST00000222271 SOGA1O94964 1423 aa23.24■■□□□ 1.31
COMP-201ENST00000222271 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
COMP-201ENST00000222271 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
COMP-201ENST00000222271 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
COMP-201ENST00000222271 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
COMP-201ENST00000222271 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
COMP-201ENST00000222271 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
COMP-201ENST00000222271 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
COMP-201ENST00000222271 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
COMP-201ENST00000222271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
COMP-201ENST00000222271 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
COMP-201ENST00000222271 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
COMP-201ENST00000222271 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
COMP-201ENST00000222271 EEA1Q15075 1411 aa23.06■■□□□ 1.28
COMP-201ENST00000222271 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
COMP-201ENST00000222271 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
COMP-201ENST00000222271 CUX1P39880 1505 aa23.04■■□□□ 1.28
COMP-201ENST00000222271 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
COMP-201ENST00000222271 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
COMP-201ENST00000222271 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
COMP-201ENST00000222271 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
COMP-201ENST00000222271 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
COMP-201ENST00000222271 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
COMP-201ENST00000222271 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
COMP-201ENST00000222271 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
COMP-201ENST00000222271 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
COMP-201ENST00000222271 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
COMP-201ENST00000222271 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
COMP-201ENST00000222271 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
COMP-201ENST00000222271 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
COMP-201ENST00000222271 KIF21BO75037 1637 aa22.8■■□□□ 1.24
COMP-201ENST00000222271 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
COMP-201ENST00000222271 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
COMP-201ENST00000222271 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
COMP-201ENST00000222271 CUX2O14529 1486 aa22.68■■□□□ 1.22
COMP-201ENST00000222271 CLIP1P30622 1438 aa22.68■■□□□ 1.22
COMP-201ENST00000222271 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
COMP-201ENST00000222271 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
COMP-201ENST00000222271 WDR62O43379 1518 aa22.65■■□□□ 1.22
COMP-201ENST00000222271 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
COMP-201ENST00000222271 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
COMP-201ENST00000222271 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
COMP-201ENST00000222271 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
COMP-201ENST00000222271 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
COMP-201ENST00000222271 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
COMP-201ENST00000222271 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.2
COMP-201ENST00000222271 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
COMP-201ENST00000222271 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
COMP-201ENST00000222271 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms