RNA–Protein interactions for RNA: ENST00000355556.6

HTR3A-202, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-202ENST00000355556 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
HTR3A-202ENST00000355556 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
HTR3A-202ENST00000355556 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
HTR3A-202ENST00000355556 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
HTR3A-202ENST00000355556 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
HTR3A-202ENST00000355556 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.9
HTR3A-202ENST00000355556 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
HTR3A-202ENST00000355556 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
HTR3A-202ENST00000355556 ABCC9O60706 1549 aa26.11■■□□□ 1.77
HTR3A-202ENST00000355556 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
HTR3A-202ENST00000355556 NACADO15069 1562 aa25.97■■□□□ 1.75
HTR3A-202ENST00000355556 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
HTR3A-202ENST00000355556 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
HTR3A-202ENST00000355556 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
HTR3A-202ENST00000355556 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
HTR3A-202ENST00000355556 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
HTR3A-202ENST00000355556 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
HTR3A-202ENST00000355556 WIZO95785 1651 aa25.18■■□□□ 1.62
HTR3A-202ENST00000355556 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
HTR3A-202ENST00000355556 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
HTR3A-202ENST00000355556 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
HTR3A-202ENST00000355556 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
HTR3A-202ENST00000355556 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
HTR3A-202ENST00000355556 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
HTR3A-202ENST00000355556 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
HTR3A-202ENST00000355556 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
HTR3A-202ENST00000355556 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
HTR3A-202ENST00000355556 SMARCA2P51531 1590 aa24.66■■□□□ 1.54
HTR3A-202ENST00000355556 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
HTR3A-202ENST00000355556 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
HTR3A-202ENST00000355556 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
HTR3A-202ENST00000355556 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
HTR3A-202ENST00000355556 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
HTR3A-202ENST00000355556 HRCP23327 699 aa24.38■■□□□ 1.49
HTR3A-202ENST00000355556 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
HTR3A-202ENST00000355556 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
HTR3A-202ENST00000355556 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
HTR3A-202ENST00000355556 SOGA1O94964 1423 aa24.13■■□□□ 1.45
HTR3A-202ENST00000355556 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
HTR3A-202ENST00000355556 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
HTR3A-202ENST00000355556 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
HTR3A-202ENST00000355556 EEA1Q15075 1411 aa24.02■■□□□ 1.44
HTR3A-202ENST00000355556 SYNJ1O43426 1573 aa24■■□□□ 1.43
HTR3A-202ENST00000355556 HMGXB3Q12766 1538 aa24■■□□□ 1.43
HTR3A-202ENST00000355556 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
HTR3A-202ENST00000355556 CSRNP3Q8WYN3 585 aa23.98■■□□□ 1.43
HTR3A-202ENST00000355556 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
HTR3A-202ENST00000355556 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
HTR3A-202ENST00000355556 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
HTR3A-202ENST00000355556 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
HTR3A-202ENST00000355556 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
HTR3A-202ENST00000355556 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
HTR3A-202ENST00000355556 KIF21BO75037 1637 aa23.72■■□□□ 1.39
HTR3A-202ENST00000355556 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
HTR3A-202ENST00000355556 CFTRP13569 1480 aa23.71■■□□□ 1.39
HTR3A-202ENST00000355556 CUX1P39880 1505 aa23.61■■□□□ 1.37
HTR3A-202ENST00000355556 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
HTR3A-202ENST00000355556 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
HTR3A-202ENST00000355556 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
HTR3A-202ENST00000355556 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
HTR3A-202ENST00000355556 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
HTR3A-202ENST00000355556 CLIP1P30622 1438 aa23.48■■□□□ 1.35
HTR3A-202ENST00000355556 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
HTR3A-202ENST00000355556 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
HTR3A-202ENST00000355556 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
HTR3A-202ENST00000355556 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
HTR3A-202ENST00000355556 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
HTR3A-202ENST00000355556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
HTR3A-202ENST00000355556 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
HTR3A-202ENST00000355556 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
HTR3A-202ENST00000355556 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
HTR3A-202ENST00000355556 CUX2O14529 1486 aa23.23■■□□□ 1.31
HTR3A-202ENST00000355556 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
HTR3A-202ENST00000355556 IGF1RP08069 1367 aa23.2■■□□□ 1.3
HTR3A-202ENST00000355556 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
HTR3A-202ENST00000355556 NESP48681 1621 aa23.17■■□□□ 1.3
HTR3A-202ENST00000355556 APLP2Q06481 763 aa23.16■■□□□ 1.3
HTR3A-202ENST00000355556 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
HTR3A-202ENST00000355556 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
HTR3A-202ENST00000355556 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
HTR3A-202ENST00000355556 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
HTR3A-202ENST00000355556 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
HTR3A-202ENST00000355556 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
HTR3A-202ENST00000355556 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
HTR3A-202ENST00000355556 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
HTR3A-202ENST00000355556 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
HTR3A-202ENST00000355556 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
HTR3A-202ENST00000355556 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
HTR3A-202ENST00000355556 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
HTR3A-202ENST00000355556 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
HTR3A-202ENST00000355556 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
HTR3A-202ENST00000355556 CUL7Q14999 1698 aa22.83■■□□□ 1.24
HTR3A-202ENST00000355556 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
HTR3A-202ENST00000355556 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
HTR3A-202ENST00000355556 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
HTR3A-202ENST00000355556 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
HTR3A-202ENST00000355556 MAP3K1Q13233 1512 aa22.75■■□□□ 1.23
HTR3A-202ENST00000355556 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
HTR3A-202ENST00000355556 CTTNBP2Q8WZ74 1663 aa22.72■■□□□ 1.23
HTR3A-202ENST00000355556 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms