RNA–Protein interactions for RNA: ENST00000421442.2

THPO-202, Transcript of thrombopoietin, humanhuman

TSL 1 (best) BASIC

Gene THPO, Length 1,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THPO-202ENST00000421442 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
THPO-202ENST00000421442 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
THPO-202ENST00000421442 ABCC9O60706 1549 aa33.63■■■□□ 2.97
THPO-202ENST00000421442 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
THPO-202ENST00000421442 NACADO15069 1562 aa32.32■■■□□ 2.77
THPO-202ENST00000421442 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
THPO-202ENST00000421442 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
THPO-202ENST00000421442 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
THPO-202ENST00000421442 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
THPO-202ENST00000421442 DCAF8L2P0C7V8 631 aa31.83■■■□□ 2.69
THPO-202ENST00000421442 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
THPO-202ENST00000421442 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
THPO-202ENST00000421442 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
THPO-202ENST00000421442 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
THPO-202ENST00000421442 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
THPO-202ENST00000421442 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
THPO-202ENST00000421442 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
THPO-202ENST00000421442 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
THPO-202ENST00000421442 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
THPO-202ENST00000421442 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
THPO-202ENST00000421442 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
THPO-202ENST00000421442 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
THPO-202ENST00000421442 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
THPO-202ENST00000421442 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
THPO-202ENST00000421442 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
THPO-202ENST00000421442 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
THPO-202ENST00000421442 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
THPO-202ENST00000421442 WIZO95785 1651 aa29.39■■■□□ 2.3
THPO-202ENST00000421442 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
THPO-202ENST00000421442 NESP48681 1621 aa29.09■■■□□ 2.25
THPO-202ENST00000421442 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
THPO-202ENST00000421442 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
THPO-202ENST00000421442 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
THPO-202ENST00000421442 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
THPO-202ENST00000421442 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
THPO-202ENST00000421442 CUX2O14529 1486 aa28.83■■■□□ 2.21
THPO-202ENST00000421442 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
THPO-202ENST00000421442 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
THPO-202ENST00000421442 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
THPO-202ENST00000421442 CFTRP13569 1480 aa28.68■■■□□ 2.18
THPO-202ENST00000421442 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
THPO-202ENST00000421442 WDR62O43379 1518 aa28.54■■■□□ 2.16
THPO-202ENST00000421442 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
THPO-202ENST00000421442 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
THPO-202ENST00000421442 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
THPO-202ENST00000421442 URB2Q14146 1524 aaKnown RBP28.31■■■□□ 2.12
THPO-202ENST00000421442 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
THPO-202ENST00000421442 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
THPO-202ENST00000421442 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
THPO-202ENST00000421442 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
THPO-202ENST00000421442 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
THPO-202ENST00000421442 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
THPO-202ENST00000421442 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
THPO-202ENST00000421442 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
THPO-202ENST00000421442 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
THPO-202ENST00000421442 CUX1P39880 1505 aa27.85■■■□□ 2.05
THPO-202ENST00000421442 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
THPO-202ENST00000421442 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
THPO-202ENST00000421442 FGD5Q6ZNL6 1462 aa27.75■■■□□ 2.03
THPO-202ENST00000421442 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
THPO-202ENST00000421442 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
THPO-202ENST00000421442 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
THPO-202ENST00000421442 SOGA1O94964 1423 aa27.6■■■□□ 2.01
THPO-202ENST00000421442 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
THPO-202ENST00000421442 CHD1O14646 1710 aa27.58■■■□□ 2.01
THPO-202ENST00000421442 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 21e-6■■■■□ 22.4
THPO-202ENST00000421442 PBRM1Q86U86 1689 aa27.55■■■□□ 2
THPO-202ENST00000421442 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
THPO-202ENST00000421442 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
THPO-202ENST00000421442 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
THPO-202ENST00000421442 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
THPO-202ENST00000421442 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
THPO-202ENST00000421442 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
THPO-202ENST00000421442 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
THPO-202ENST00000421442 OSCARQ8IYS5 282 aa27.36■■□□□ 1.97
THPO-202ENST00000421442 GAPVD1Q14C86 1478 aa27.35■■□□□ 1.97
THPO-202ENST00000421442 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
THPO-202ENST00000421442 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
THPO-202ENST00000421442 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
THPO-202ENST00000421442 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
THPO-202ENST00000421442 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
THPO-202ENST00000421442 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
THPO-202ENST00000421442 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
THPO-202ENST00000421442 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
THPO-202ENST00000421442 FBLN2P98095 1184 aa27.1■■□□□ 1.93
THPO-202ENST00000421442 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
THPO-202ENST00000421442 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
THPO-202ENST00000421442 CEP170Q5SW79 1584 aa27.01■■□□□ 1.92
THPO-202ENST00000421442 FHAD1B1AJZ9 1412 aa27.01■■□□□ 1.91
THPO-202ENST00000421442 CUL7Q14999 1698 aa26.98■■□□□ 1.91
THPO-202ENST00000421442 NUP160Q12769 1436 aa26.96■■□□□ 1.91
THPO-202ENST00000421442 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
THPO-202ENST00000421442 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
THPO-202ENST00000421442 SHROOM2Q13796 1616 aa26.92■■□□□ 1.9
THPO-202ENST00000421442 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
THPO-202ENST00000421442 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
THPO-202ENST00000421442 IGF1RP08069 1367 aa26.8■■□□□ 1.88
THPO-202ENST00000421442 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
THPO-202ENST00000421442 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
THPO-202ENST00000421442 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms