RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
PRKN-203ENST00000366894 ABCC9O60706 1549 aa33.42■■■□□ 2.94
PRKN-203ENST00000366894 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
PRKN-203ENST00000366894 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
PRKN-203ENST00000366894 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
PRKN-203ENST00000366894 NACADO15069 1562 aa31.4■■■□□ 2.62
PRKN-203ENST00000366894 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
PRKN-203ENST00000366894 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
PRKN-203ENST00000366894 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
PRKN-203ENST00000366894 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
PRKN-203ENST00000366894 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
PRKN-203ENST00000366894 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
PRKN-203ENST00000366894 BICRAQ9NZM4 1560 aa30.72■■■□□ 2.51
PRKN-203ENST00000366894 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
PRKN-203ENST00000366894 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
PRKN-203ENST00000366894 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
PRKN-203ENST00000366894 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
PRKN-203ENST00000366894 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
PRKN-203ENST00000366894 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
PRKN-203ENST00000366894 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
PRKN-203ENST00000366894 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
PRKN-203ENST00000366894 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
PRKN-203ENST00000366894 CUX2O14529 1486 aa29■■■□□ 2.23
PRKN-203ENST00000366894 NCAPD3P42695 1498 aa29■■■□□ 2.23
PRKN-203ENST00000366894 ERCC6Q03468 1493 aa28.93■■■□□ 2.22
PRKN-203ENST00000366894 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
PRKN-203ENST00000366894 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
PRKN-203ENST00000366894 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
PRKN-203ENST00000366894 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
PRKN-203ENST00000366894 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
PRKN-203ENST00000366894 WIZO95785 1651 aa28.58■■■□□ 2.17
PRKN-203ENST00000366894 NESP48681 1621 aa28.58■■■□□ 2.17
PRKN-203ENST00000366894 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
PRKN-203ENST00000366894 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
PRKN-203ENST00000366894 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
PRKN-203ENST00000366894 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
PRKN-203ENST00000366894 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
PRKN-203ENST00000366894 PDS5BQ9NTI5 1447 aa28.22■■■□□ 2.11
PRKN-203ENST00000366894 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
PRKN-203ENST00000366894 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
PRKN-203ENST00000366894 CFTRP13569 1480 aa27.95■■■□□ 2.07
PRKN-203ENST00000366894 WDR62O43379 1518 aa27.95■■■□□ 2.06
PRKN-203ENST00000366894 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
PRKN-203ENST00000366894 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
PRKN-203ENST00000366894 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
PRKN-203ENST00000366894 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
PRKN-203ENST00000366894 PRDM2Q13029 1718 aa27.7■■■□□ 2.02
PRKN-203ENST00000366894 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
PRKN-203ENST00000366894 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
PRKN-203ENST00000366894 OSCARQ8IYS5 282 aa27.56■■■□□ 2
PRKN-203ENST00000366894 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
PRKN-203ENST00000366894 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
PRKN-203ENST00000366894 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
PRKN-203ENST00000366894 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
PRKN-203ENST00000366894 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
PRKN-203ENST00000366894 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
PRKN-203ENST00000366894 CUX1P39880 1505 aa27.13■■□□□ 1.93
PRKN-203ENST00000366894 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
PRKN-203ENST00000366894 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
PRKN-203ENST00000366894 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
PRKN-203ENST00000366894 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
PRKN-203ENST00000366894 SOGA1O94964 1423 aa26.99■■□□□ 1.91
PRKN-203ENST00000366894 CHD1O14646 1710 aa26.96■■□□□ 1.91
PRKN-203ENST00000366894 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
PRKN-203ENST00000366894 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
PRKN-203ENST00000366894 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
PRKN-203ENST00000366894 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
PRKN-203ENST00000366894 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
PRKN-203ENST00000366894 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
PRKN-203ENST00000366894 FBLN2P98095 1184 aa26.84■■□□□ 1.89
PRKN-203ENST00000366894 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 TRHP20396 242 aaPredicted RBP26.78■■□□□ 1.88
PRKN-203ENST00000366894 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
PRKN-203ENST00000366894 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
PRKN-203ENST00000366894 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 CLASP1Q7Z460 1538 aa26.65■■□□□ 1.86
PRKN-203ENST00000366894 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
PRKN-203ENST00000366894 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
PRKN-203ENST00000366894 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
PRKN-203ENST00000366894 SYNJ2O15056 1496 aa26.53■■□□□ 1.84
PRKN-203ENST00000366894 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
PRKN-203ENST00000366894 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
PRKN-203ENST00000366894 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
PRKN-203ENST00000366894 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
PRKN-203ENST00000366894 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
PRKN-203ENST00000366894 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
PRKN-203ENST00000366894 NUP160Q12769 1436 aa26.27■■□□□ 1.8
PRKN-203ENST00000366894 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
PRKN-203ENST00000366894 IGF1RP08069 1367 aa26.25■■□□□ 1.79
PRKN-203ENST00000366894 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
PRKN-203ENST00000366894 CUL7Q14999 1698 aa26.14■■□□□ 1.78
PRKN-203ENST00000366894 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms