RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
PRKN-203ENST00000366894 ABCC9O60706 1549 aa33.42■■■□□ 2.94
PRKN-203ENST00000366894 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
PRKN-203ENST00000366894 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
PRKN-203ENST00000366894 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
PRKN-203ENST00000366894 NACADO15069 1562 aa31.4■■■□□ 2.62
PRKN-203ENST00000366894 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
PRKN-203ENST00000366894 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
PRKN-203ENST00000366894 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
PRKN-203ENST00000366894 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
PRKN-203ENST00000366894 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
PRKN-203ENST00000366894 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
PRKN-203ENST00000366894 BICRAQ9NZM4 1560 aa30.72■■■□□ 2.51
PRKN-203ENST00000366894 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
PRKN-203ENST00000366894 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
PRKN-203ENST00000366894 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
PRKN-203ENST00000366894 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
PRKN-203ENST00000366894 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
PRKN-203ENST00000366894 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
PRKN-203ENST00000366894 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
PRKN-203ENST00000366894 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
PRKN-203ENST00000366894 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
PRKN-203ENST00000366894 CUX2O14529 1486 aa29■■■□□ 2.23
PRKN-203ENST00000366894 NCAPD3P42695 1498 aa29■■■□□ 2.23
PRKN-203ENST00000366894 ERCC6Q03468 1493 aa28.93■■■□□ 2.22
PRKN-203ENST00000366894 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
PRKN-203ENST00000366894 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
PRKN-203ENST00000366894 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
PRKN-203ENST00000366894 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
PRKN-203ENST00000366894 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
PRKN-203ENST00000366894 WIZO95785 1651 aa28.58■■■□□ 2.17
PRKN-203ENST00000366894 NESP48681 1621 aa28.58■■■□□ 2.17
PRKN-203ENST00000366894 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
PRKN-203ENST00000366894 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
PRKN-203ENST00000366894 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
PRKN-203ENST00000366894 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
PRKN-203ENST00000366894 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
PRKN-203ENST00000366894 PDS5BQ9NTI5 1447 aa28.22■■■□□ 2.11
PRKN-203ENST00000366894 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
PRKN-203ENST00000366894 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
PRKN-203ENST00000366894 CFTRP13569 1480 aa27.95■■■□□ 2.07
PRKN-203ENST00000366894 WDR62O43379 1518 aa27.95■■■□□ 2.06
PRKN-203ENST00000366894 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
PRKN-203ENST00000366894 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
PRKN-203ENST00000366894 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
PRKN-203ENST00000366894 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
PRKN-203ENST00000366894 PRDM2Q13029 1718 aa27.7■■■□□ 2.02
PRKN-203ENST00000366894 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
PRKN-203ENST00000366894 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
PRKN-203ENST00000366894 OSCARQ8IYS5 282 aa27.56■■■□□ 2
PRKN-203ENST00000366894 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
PRKN-203ENST00000366894 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
PRKN-203ENST00000366894 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
PRKN-203ENST00000366894 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
PRKN-203ENST00000366894 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
PRKN-203ENST00000366894 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
PRKN-203ENST00000366894 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
PRKN-203ENST00000366894 CUX1P39880 1505 aa27.13■■□□□ 1.93
PRKN-203ENST00000366894 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
PRKN-203ENST00000366894 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
PRKN-203ENST00000366894 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
PRKN-203ENST00000366894 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
PRKN-203ENST00000366894 SOGA1O94964 1423 aa26.99■■□□□ 1.91
PRKN-203ENST00000366894 CHD1O14646 1710 aa26.96■■□□□ 1.91
PRKN-203ENST00000366894 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91
PRKN-203ENST00000366894 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
PRKN-203ENST00000366894 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
PRKN-203ENST00000366894 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
PRKN-203ENST00000366894 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
PRKN-203ENST00000366894 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
PRKN-203ENST00000366894 FBLN2P98095 1184 aa26.84■■□□□ 1.89
PRKN-203ENST00000366894 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.89
PRKN-203ENST00000366894 TRHP20396 242 aaPredicted RBP26.78■■□□□ 1.88
PRKN-203ENST00000366894 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
PRKN-203ENST00000366894 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
PRKN-203ENST00000366894 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
PRKN-203ENST00000366894 CLASP1Q7Z460 1538 aa26.65■■□□□ 1.86
PRKN-203ENST00000366894 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
PRKN-203ENST00000366894 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
PRKN-203ENST00000366894 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
PRKN-203ENST00000366894 SYNJ2O15056 1496 aa26.53■■□□□ 1.84
PRKN-203ENST00000366894 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
PRKN-203ENST00000366894 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
PRKN-203ENST00000366894 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
PRKN-203ENST00000366894 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
PRKN-203ENST00000366894 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
PRKN-203ENST00000366894 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
PRKN-203ENST00000366894 NUP160Q12769 1436 aa26.27■■□□□ 1.8
PRKN-203ENST00000366894 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
PRKN-203ENST00000366894 IGF1RP08069 1367 aa26.25■■□□□ 1.79
PRKN-203ENST00000366894 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
PRKN-203ENST00000366894 CUL7Q14999 1698 aa26.14■■□□□ 1.78
PRKN-203ENST00000366894 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms