Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.243e-7■□□□□ 10.5
EIF3DO15371 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.173e-7■□□□□ 10.5
EIF3DO15371 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.133e-7■□□□□ 10.5
EIF3DO15371 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.042e-6■□□□□ 10.5
EIF3DO15371 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)21.44■■□□□ 1.022e-9■□□□□ 10.5
EIF3DO15371 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.013e-7■□□□□ 10.5
EIF3DO15371 CNPY2-210ENST00000551720 586 ntTSL 321.13■□□□□ 0.973e-7■□□□□ 10.5
EIF3DO15371 AC073896.1-203ENST00000548360 512 ntTSL 421.13■□□□□ 0.973e-7■□□□□ 10.5
EIF3DO15371 PCMT1-209ENST00000494411 600 ntTSL 420.73■□□□□ 0.913e-7■□□□□ 10.5
EIF3DO15371 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.66■□□□□ 0.743e-7■□□□□ 10.5
EIF3DO15371 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)19.52■□□□□ 0.723e-7■□□□□ 10.5
EIF3DO15371 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.713e-7■□□□□ 10.5
EIF3DO15371 PCMT1-207ENST00000484601 1095 ntTSL 519.48■□□□□ 0.713e-7■□□□□ 10.5
EIF3DO15371 CNPY2-206ENST00000548013 817 ntTSL 1 (best)19.28■□□□□ 0.683e-7■□□□□ 10.5
EIF3DO15371 AC073896.1-202ENST00000547423 566 ntTSL 419.15■□□□□ 0.663e-7■□□□□ 10.5
EIF3DO15371 HNF4A-207ENST00000609262 540 ntTSL 1 (best)18.97■□□□□ 0.633e-7■□□□□ 10.5
EIF3DO15371 SRRT-204ENST00000448764 1607 ntTSL 518.76■□□□□ 0.592e-9■□□□□ 10.5
EIF3DO15371 CNPY2-208ENST00000551286 484 ntTSL 518.65■□□□□ 0.583e-7■□□□□ 10.5
EIF3DO15371 CNPY2-202ENST00000546388 670 ntTSL 1 (best)18.05■□□□□ 0.483e-7■□□□□ 10.5
EIF3DO15371 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)17.97■□□□□ 0.472e-6■□□□□ 10.5
EIF3DO15371 CNPY2-211ENST00000553164 666 ntTSL 517.94■□□□□ 0.463e-7■□□□□ 10.5
EIF3DO15371 PCMT1-204ENST00000460828 582 ntTSL 517.73■□□□□ 0.433e-7■□□□□ 10.5
EIF3DO15371 AAAS-215ENST00000549983 860 ntTSL 317.6■□□□□ 0.413e-7■□□□□ 10.5
EIF3DO15371 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.94■□□□□ 0.33e-7■□□□□ 10.5
EIF3DO15371 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.86■□□□□ 0.293e-7■□□□□ 10.5
EIF3DO15371 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)16.77■□□□□ 0.282e-6■□□□□ 10.5
EIF3DO15371 PCMT1-210ENST00000495487 548 ntTSL 316.19■□□□□ 0.183e-7■□□□□ 10.5
EIF3DO15371 SRRT-210ENST00000477529 540 ntTSL 215.33■□□□□ 0.042e-9■□□□□ 10.5
EIF3DO15371 EIF4G1-235ENST00000482303 493 ntTSL 214.91□□□□□ -0.028e-10■□□□□ 10.5
EIF3DO15371 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.75□□□□□ -0.053e-7■□□□□ 10.5
EIF3DO15371 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.073e-7■□□□□ 10.5
EIF3DO15371 AAAS-214ENST00000549821 596 ntTSL 314.21□□□□□ -0.133e-7■□□□□ 10.5
EIF3DO15371 AAAS-218ENST00000551724 552 ntTSL 414.08□□□□□ -0.163e-7■□□□□ 10.5
EIF3DO15371 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.95□□□□□ -0.183e-7■□□□□ 10.5
EIF3DO15371 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.218e-10■□□□□ 10.5
EIF3DO15371 AAAS-219ENST00000552161 585 ntTSL 213.7□□□□□ -0.223e-7■□□□□ 10.5
EIF3DO15371 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.65□□□□□ -0.223e-7■□□□□ 10.5
EIF3DO15371 AAAS-210ENST00000548258 550 ntTSL 513.12□□□□□ -0.313e-7■□□□□ 10.5
EIF3DO15371 CNPY2-209ENST00000551475 674 ntTSL 512.7□□□□□ -0.383e-7■□□□□ 10.5
EIF3DO15371 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC11.5□□□□□ -0.573e-7■□□□□ 10.5
EIF3DO15371 CABIN1-210ENST00000484593 561 ntTSL 311.43□□□□□ -0.583e-7■□□□□ 10.5
EIF3DO15371 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.593e-7■□□□□ 10.5
EIF3DO15371 CNPY2-205ENST00000547570 624 ntTSL 311.3□□□□□ -0.63e-7■□□□□ 10.5
EIF3DO15371 AAAS-209ENST00000547761 827 ntTSL 510.55□□□□□ -0.723e-7■□□□□ 10.5
EIF3DO15371 AAAS-208ENST00000547757 949 ntTSL 210.55□□□□□ -0.723e-7■□□□□ 10.5
EIF3DO15371 PCMT1-208ENST00000486585 801 ntTSL 310.45□□□□□ -0.743e-7■□□□□ 10.5
EIF3DO15371 AAAS-204ENST00000546562 627 ntTSL 210.02□□□□□ -0.813e-7■□□□□ 10.5
EIF3DO15371 VPS13B-210ENST00000521932 1055 ntTSL 39.15□□□□□ -0.949e-7■□□□□ 10.5
EIF3DO15371 SRRT-203ENST00000445337 446 ntTSL 36.92□□□□□ -1.32e-9■□□□□ 10.5
EIF3DO15371 AAAS-211ENST00000548880 577 ntTSL 26.38□□□□□ -1.393e-7■□□□□ 10.5
EIF3DO15371 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.033e-6■□□□□ 10.4
EIF3DO15371 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.563e-6■□□□□ 10.4
EIF3DO15371 PKD1-209ENST00000472659 661 ntTSL 320.18■□□□□ 0.826e-8■□□□□ 10.4
EIF3DO15371 LAMA5-210ENST00000491036 728 ntTSL 217.3■□□□□ 0.362e-11■□□□□ 10.4
EIF3DO15371 PKD1-236ENST00000568796 447 ntTSL 316.33■□□□□ 0.28e-8■□□□□ 10.4
EIF3DO15371 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.593e-6■□□□□ 10.4
EIF3DO15371 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.063e-6■□□□□ 10.4
EIF3DO15371 MSH2-203ENST00000454849 560 ntTSL 426.94■■□□□ 1.92e-7■□□□□ 10.4
EIF3DO15371 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.031e-8■□□□□ 10.3
EIF3DO15371 RANBP1-210ENST00000435265 1879 ntTSL 221.59■■□□□ 1.051e-8■□□□□ 10.3
EIF3DO15371 RANBP1-214ENST00000488484 699 ntTSL 216.64■□□□□ 0.251e-8■□□□□ 10.3
EIF3DO15371 RANBP1-203ENST00000411892 584 ntTSL 216.19■□□□□ 0.181e-8■□□□□ 10.3
EIF3DO15371 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.08■□□□□ 0.161e-8■□□□□ 10.3
EIF3DO15371 RANBP1-209ENST00000432879 744 ntTSL 315.78■□□□□ 0.121e-8■□□□□ 10.3
EIF3DO15371 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.111e-8■□□□□ 10.3
EIF3DO15371 RANBP1-212ENST00000467920 529 ntTSL 25.31□□□□□ -1.561e-8■□□□□ 10.3
EIF3DO15371 NEAT1-202ENST00000501122 22743 ntBASIC4.88□□□□□ -1.631e-65■□□□□ 10.3
EIF3DO15371 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.315e-8■□□□□ 10.3
EIF3DO15371 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.465e-8■□□□□ 10.3
EIF3DO15371 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.525e-8■□□□□ 10.3
EIF3DO15371 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.447e-7■□□□□ 10.3
EIF3DO15371 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.422e-8■□□□□ 10.3
EIF3DO15371 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)11.84□□□□□ -0.512e-8■□□□□ 10.3
EIF3DO15371 LRMDA-210ENST00000593817 221 ntTSL 35.33□□□□□ -1.562e-8■□□□□ 10.3
EIF3DO15371 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)9.39□□□□□ -0.918e-8■□□□□ 10.3
EIF3DO15371 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.145e-7■□□□□ 10.3
EIF3DO15371 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.025e-7■□□□□ 10.3
EIF3DO15371 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.185e-7■□□□□ 10.3
EIF3DO15371 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC10.11□□□□□ -0.796e-52■□□□□ 10.3
EIF3DO15371 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.896e-52■□□□□ 10.3
EIF3DO15371 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.896e-52■□□□□ 10.3
EIF3DO15371 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.054e-8■□□□□ 10.3
EIF3DO15371 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC13.53□□□□□ -0.244e-8■□□□□ 10.3
EIF3DO15371 ARID3A-205ENST00000587532 1016 ntTSL 519.53■□□□□ 0.721e-6■□□□□ 10.3
EIF3DO15371 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.581e-6■□□□□ 10.3
EIF3DO15371 ARID3A-202ENST00000457152 549 ntTSL 514.03□□□□□ -0.161e-6■□□□□ 10.3
EIF3DO15371 BTAF1-202ENST00000471217 2003 ntTSL 1 (best)6.62□□□□□ -1.352e-6■□□□□ 10.3
EIF3DO15371 BRD2-207ENST00000463639 946 ntTSL 26.35□□□□□ -1.393e-10■□□□□ 10.2
EIF3DO15371 PATJ-207ENST00000484562 5448 ntTSL 1 (best)11.63□□□□□ -0.552e-7■□□□□ 10.2
EIF3DO15371 PATJ-214ENST00000635023 5242 ntTSL 510.33□□□□□ -0.762e-7■□□□□ 10.2
EIF3DO15371 PATJ-216ENST00000635214 4863 ntTSL 1 (best)9.15□□□□□ -0.942e-7■□□□□ 10.2
EIF3DO15371 PATJ-204ENST00000459752 5349 ntTSL 1 (best)9.11□□□□□ -0.952e-7■□□□□ 10.2
EIF3DO15371 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.252e-7■□□□□ 10.2
EIF3DO15371 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.37□□□□□ -1.552e-7■□□□□ 10.2
EIF3DO15371 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.9□□□□□ -1.632e-7■□□□□ 10.2
EIF3DO15371 USP34-204ENST00000453133 1409 ntTSL 54.97□□□□□ -1.615e-8■□□□□ 10.2
EIF3DO15371 LRBA-210ENST00000510841 2288 ntTSL 217.96■□□□□ 0.477e-6■□□□□ 10.2
EIF3DO15371 LRBA-212ENST00000514435 2140 ntTSL 215.76■□□□□ 0.117e-6■□□□□ 10.2
EIF3DO15371 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.022e-6■□□□□ 10.2
EIF3DO15371 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.622e-6■□□□□ 10.2
Retrieved 100 of 4,069 protein–RNA pairs in 24.6 ms