RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
HNF4A-203ENST00000372920 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
HNF4A-203ENST00000372920 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.54
HNF4A-203ENST00000372920 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
HNF4A-203ENST00000372920 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
HNF4A-203ENST00000372920 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
HNF4A-203ENST00000372920 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
HNF4A-203ENST00000372920 HRCP23327 699 aa30.12■■■□□ 2.41
HNF4A-203ENST00000372920 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
HNF4A-203ENST00000372920 PCGF6Q9BYE7 350 aa29.82■■■□□ 2.36
HNF4A-203ENST00000372920 DCAF1Q9Y4B6 1507 aa29.73■■■□□ 2.35
HNF4A-203ENST00000372920 PPARGC1BQ86YN6 1023 aaKnown RBP29.45■■■□□ 2.31
HNF4A-203ENST00000372920 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
HNF4A-203ENST00000372920 ABCC9O60706 1549 aa29.13■■■□□ 2.25
HNF4A-203ENST00000372920 TRIM26Q12899 539 aaPredicted RBP29.12■■■□□ 2.25
HNF4A-203ENST00000372920 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
HNF4A-203ENST00000372920 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
HNF4A-203ENST00000372920 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
HNF4A-203ENST00000372920 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
HNF4A-203ENST00000372920 ZEB1P37275 1124 aaPredicted RBP28.66■■■□□ 2.18
HNF4A-203ENST00000372920 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
HNF4A-203ENST00000372920 EHMT2Q96KQ7 1210 aa28.36■■■□□ 2.13
HNF4A-203ENST00000372920 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
HNF4A-203ENST00000372920 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.12
HNF4A-203ENST00000372920 NACADO15069 1562 aa28.2■■■□□ 2.1
HNF4A-203ENST00000372920 WIZO95785 1651 aa28.12■■■□□ 2.09
HNF4A-203ENST00000372920 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
HNF4A-203ENST00000372920 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
HNF4A-203ENST00000372920 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
HNF4A-203ENST00000372920 EIF4G1Q04637 1599 aaKnown RBP27.93■■■□□ 2.06
HNF4A-203ENST00000372920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.9■■■□□ 2.06
HNF4A-203ENST00000372920 CCER1Q8TC90 406 aaPredicted RBP27.84■■■□□ 2.05
HNF4A-203ENST00000372920 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
HNF4A-203ENST00000372920 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
HNF4A-203ENST00000372920 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
HNF4A-203ENST00000372920 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
HNF4A-203ENST00000372920 ACIN1Q9UKV3 1341 aaKnown RBP27.62■■■□□ 2.01
HNF4A-203ENST00000372920 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
HNF4A-203ENST00000372920 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
HNF4A-203ENST00000372920 NEUROD1Q13562 356 aa27.55■■■□□ 2
HNF4A-203ENST00000372920 SMARCA2P51531 1590 aa27.54■■■□□ 2
HNF4A-203ENST00000372920 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
HNF4A-203ENST00000372920 SMARCA4P51532 1647 aa27.53■■■□□ 2
HNF4A-203ENST00000372920 SOGA1O94964 1423 aa27.53■■■□□ 2
HNF4A-203ENST00000372920 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
HNF4A-203ENST00000372920 EEA1Q15075 1411 aa27.4■■□□□ 1.98
HNF4A-203ENST00000372920 CSRNP3Q8WYN3 585 aa27.4■■□□□ 1.98
HNF4A-203ENST00000372920 RUSC2Q8N2Y8 1516 aa27.37■■□□□ 1.97
HNF4A-203ENST00000372920 CENPBP07199 599 aaPredicted RBP27.37■■□□□ 1.97
HNF4A-203ENST00000372920 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
HNF4A-203ENST00000372920 GTF3C3Q9Y5Q9 886 aa27.31■■□□□ 1.96
HNF4A-203ENST00000372920 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
HNF4A-203ENST00000372920 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
HNF4A-203ENST00000372920 ZNF316A6NFI3 1004 aaPredicted RBP27.21■■□□□ 1.95
HNF4A-203ENST00000372920 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
HNF4A-203ENST00000372920 HNRNPUL2Q1KMD3 747 aaKnown RBP27.02■■□□□ 1.92
HNF4A-203ENST00000372920 KIF21BO75037 1637 aa27■■□□□ 1.91
HNF4A-203ENST00000372920 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
HNF4A-203ENST00000372920 CLIP1P30622 1438 aa26.98■■□□□ 1.91
HNF4A-203ENST00000372920 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.916e-6■■□□□ 12.8
HNF4A-203ENST00000372920 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
HNF4A-203ENST00000372920 YTHDC1Q96MU7 727 aaKnown RBP26.94■■□□□ 1.9
HNF4A-203ENST00000372920 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
HNF4A-203ENST00000372920 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
HNF4A-203ENST00000372920 MIER1Q8N108 512 aa26.9■■□□□ 1.9
HNF4A-203ENST00000372920 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
HNF4A-203ENST00000372920 RAPGEF2Q9Y4G8 1499 aa26.82■■□□□ 1.88
HNF4A-203ENST00000372920 APLP2Q06481 763 aa26.82■■□□□ 1.88
HNF4A-203ENST00000372920 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
HNF4A-203ENST00000372920 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
HNF4A-203ENST00000372920 MYT1Q01538 1121 aa26.62■■□□□ 1.85
HNF4A-203ENST00000372920 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
HNF4A-203ENST00000372920 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
HNF4A-203ENST00000372920 DHX57Q6P158 1386 aaKnown RBP26.54■■□□□ 1.84
HNF4A-203ENST00000372920 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
HNF4A-203ENST00000372920 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
HNF4A-203ENST00000372920 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
HNF4A-203ENST00000372920 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
HNF4A-203ENST00000372920 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.83
HNF4A-203ENST00000372920 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
HNF4A-203ENST00000372920 CUX1P39880 1505 aa26.27■■□□□ 1.8
HNF4A-203ENST00000372920 CUX2O14529 1486 aa26.27■■□□□ 1.8
HNF4A-203ENST00000372920 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
HNF4A-203ENST00000372920 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
HNF4A-203ENST00000372920 SUPT16HQ9Y5B9 1047 aaKnown RBP26.21■■□□□ 1.79
HNF4A-203ENST00000372920 ARHGAP35Q9NRY4 1499 aa26.2■■□□□ 1.78
HNF4A-203ENST00000372920 ITGAEP38570 1179 aa26.14■■□□□ 1.78
HNF4A-203ENST00000372920 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
HNF4A-203ENST00000372920 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
HNF4A-203ENST00000372920 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
HNF4A-203ENST00000372920 CFTRP13569 1480 aa26.06■■□□□ 1.76
HNF4A-203ENST00000372920 MAPKBP1O60336 1514 aa26.03■■□□□ 1.76
HNF4A-203ENST00000372920 TIAM1Q13009 1591 aa25.97■■□□□ 1.75
HNF4A-203ENST00000372920 KCNH8Q96L42 1107 aa25.97■■□□□ 1.75
HNF4A-203ENST00000372920 IGF1RP08069 1367 aa25.96■■□□□ 1.75
HNF4A-203ENST00000372920 MAP3K1Q13233 1512 aa25.95■■□□□ 1.75
HNF4A-203ENST00000372920 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
HNF4A-203ENST00000372920 TSHZ2Q9NRE2 1034 aa25.9■■□□□ 1.74
HNF4A-203ENST00000372920 LRRC9Q6ZRR7 1453 aa25.89■■□□□ 1.74
HNF4A-203ENST00000372920 PHLDB1Q86UU1 1377 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms